| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0864 |
|---|
| Symbol | |
|---|
| ID | 4011367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 888010 |
|---|
| End bp | 888375 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637940544 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_547718 |
|---|
| Protein GI | 91786766 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2331] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02605] putative regulatory protein, FmdB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.115967 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAATCT ACGCCTATAA ATGCGAGTCC TGCGGGCATG CCAAGGACGT CTTGCGAAAA
ATATCGGACG CGCCCTTGAC CGATTGCCCG CACTGCGGGA GCCCCACTTT CACGAAACAA
GTCACCGCAG CCGGCTTTCA GCTCAAGGGC TCGGGCTGGT ACGTGACCGA TTTCCGCGGC
ACGGACAAGG CGGCGCAGCC TGCCAAATCG GGTGACGGCG GGTCGACGGC GGCGGTAAGC
ACAGGCAGCA AATCCGCCGA TACAGGCGCG GCCGCTGCAA CGGCCACTGC CCCCGCAGCA
GCTACGCCTG CTGCAGCGCC GGCCAGCCAG GGCGCGACCA GCGATTCGTC GTCCAAAGCC
GCGTGA
|
|---|
| Protein sequence | MPIYAYKCES CGHAKDVLRK ISDAPLTDCP HCGSPTFTKQ VTAAGFQLKG SGWYVTDFRG
TDKAAQPAKS GDGGSTAAVS TGSKSADTGA AAATATAPAA ATPAAAPASQ GATSDSSSKA
A
|
|---|
| |