| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0863 |
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| Symbol | ubiB |
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| ID | 4011366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 886307 |
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| End bp | 887860 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637940543 |
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| Product | putative ubiquinone biosynthesis protein UbiB |
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| Protein accession | YP_547717 |
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| Protein GI | 91786765 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0661] Predicted unusual protein kinase |
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| TIGRFAM ID | [TIGR01982] 2-polyprenylphenol 6-hydroxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0740151 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGGG TGTTCAGGGG CGGGTTCATC GTTTGGACCG TGCTTCGCTT CGGCCTCGAC
GAACTGGTGT TGTCCAGCTT CGAAAAGCCG TGGATCCGCC GGTTGACCCG CATCGTCTCG
CTGGGGCGCA ACCTGAGCGC TCCCCGTGGC GCCCGTCTTC GCGAGGCACT GGAAGCGCTG
GGGCCCATCT TCGTCAAGTT CGGGCAGGTG ATGTCCACAC GGCGCGACCT GCTGCCGCCC
GACATCGCCG ATGAGCTGGC GCGCCTGCAG GACCGGGTGC CACCCTTTGA ATCGTCGGTG
GCCGTTGCCA TCATCGAAAA GGCGTTTGGC CGGCCCCTGG ACCGTATATT CGCGACGTTT
GAGCACACCC CCGTGGCCAG CGCGTCGATT GCCCAGGTTC ACTTTGCGAC GCTGCACGAC
GGCCGTGAAG TGGCAGTCAA GGTATTGCGC CCCAACATGC TGCCCGCGAT CGAGAAAGAC
CTCGCGCTCA TGCACATGAT GGCCGGCTGG GTGGAAGGCG CATCCGCCGA TGGCAAGCGC
CTCAAGCCGC GCGAAGTGGT AGCCGAGTTT GACAAATACC TGCACGACGA GCTCGACTTG
CTGCGTGAGG CCGCCAATGC GGCGCAACTG CGCCGGAACA TGCAGGACCT CAATCTCGTC
ATGATCCCGG AAATGTTCTG GGACTACTGC ATGCCCGATG TCATGGTGAT GGAGCGCATG
AAGGGGGTGC CCATCGGCCA GAGCCAGCGC CTGCGCGACG CCAGCGTGGA CATGAAGAAG
CTGGCTCGCG ACGGCGTCAC CATTTTCTTC ACGCAGGTGT TCCGCGATGG CTTTTTTCAT
GCCGACATGC ACCCGGGCAA TATTCAGGTC AGCCTGGCCC CGGACACCTT CGGGCGCTAT
ATTTCGCTGG ATTTCGGCAT CGTGGGCACG CTCACAGAGG TGGACAAGGA GTATCTGGCG
CACAACTTCA GCGCTTTCTT CCAGCGCGAC TACAAGCGCG TTGCCGAACT GCATCTGGAG
TCCGGCTGGG TGCCCGCCAC CACCCGTGTG GACGAGCTGG AAGCCGCCAT TCGCGCCTGC
TGCGAGCCGT ATTTCGACCG GCCGCTCAAG GAAATCTCGC TGGGCCTGGT GCTGATGCGC
CTGTTCCAGA CCTCGCGCCG TTTCCACGTG GAAATTCAGC CGCAACTGGT CCTGCTGCAA
AAAACCCTGC TCAATATCGA AGGGCTGGGG CGCGAACTGG ATCCCGAACT TGACCTCTGG
AGCACGGCCA AGCCTTTTCT TGAAAAATGG ATGCTGGAGC AGGTGGGCCC CGAAAAATTG
CTGGCCCAGC TCAAGGCCGA GGCCCCGGCC TATGCCAAGC TGCTGCCCGT GCTGCCGCGC
CTGCTGGCCC AGTACCTCAA AGGGCCGTCA GGGCCGAGCC GCCGCGACCT GGAAGCCCTG
CTGGCCGAAC AAAAGCGCAC CAACAAACTG CTGCAAAGCC TGATCTACGG TGGTTTGGGC
TTTGTGCTGG GCCTGATTGC CATGCAACTG CTGCTGCGGG TCCGTATTTT TTGA
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| Protein sequence | MTRVFRGGFI VWTVLRFGLD ELVLSSFEKP WIRRLTRIVS LGRNLSAPRG ARLREALEAL
GPIFVKFGQV MSTRRDLLPP DIADELARLQ DRVPPFESSV AVAIIEKAFG RPLDRIFATF
EHTPVASASI AQVHFATLHD GREVAVKVLR PNMLPAIEKD LALMHMMAGW VEGASADGKR
LKPREVVAEF DKYLHDELDL LREAANAAQL RRNMQDLNLV MIPEMFWDYC MPDVMVMERM
KGVPIGQSQR LRDASVDMKK LARDGVTIFF TQVFRDGFFH ADMHPGNIQV SLAPDTFGRY
ISLDFGIVGT LTEVDKEYLA HNFSAFFQRD YKRVAELHLE SGWVPATTRV DELEAAIRAC
CEPYFDRPLK EISLGLVLMR LFQTSRRFHV EIQPQLVLLQ KTLLNIEGLG RELDPELDLW
STAKPFLEKW MLEQVGPEKL LAQLKAEAPA YAKLLPVLPR LLAQYLKGPS GPSRRDLEAL
LAEQKRTNKL LQSLIYGGLG FVLGLIAMQL LLRVRIF
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