| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0841 |
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| Symbol | |
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| ID | 4010957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 863324 |
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| End bp | 865060 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637940521 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_547695 |
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| Protein GI | 91786743 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0657263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.685721 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCTG TCGATACTGC TATCAACGAA CCGCCCGCCT TGGCATTGCC CGGATTGGGC
CGGGCATTGG TGGTGGCAGG CAAGCTGGGC CAGAAGGCCG CTGAAGACAT TTTTCGCAAG
GCCCAAAGCG GGCGCACCAG CTTCATTGCC GAGCTGACCG GTTCAGGCGC CGTGTCTGCG
TTTGACCTGG CGCACACGAT GTCCATCGCG TTCGCCGCGC CTTTGCTCGA TCTGGAGGCC
ATCGACGTCC AGCGTTTGCC CAAAGGCCTG CTCGACACCA AGATTTGCAC GACTTACCGC
ATTGTCGTGC TGAGCAAGCG CAATAACCGC CTGATCGTCG CAACGGCAGA TCCCTCTGAC
CAGGAAGCGG CGGAAAAGAT CAAGTTTTCC ACCCAGATGG GTGTGGACTG GGTGATTGCC
GAGTATGACA AGCTGTCCAA ACTGGTGGAG GCGTCGAGTA CCACGGCTGC CGAGGCCATG
GAGAGCATCA TCGGCGATGA TTTCGAGTTC GATGAATCTT CGGTGGATTC AGGCGCTGCT
GAAGACAGCG ATGCCAGCGT CTCTGAAGTC GAAGATGCAC CGGTCGTCAA ATTTCTCCAG
AAGATGCTGC TCGATGCCTT CAGCATGCGG GCCTCTGATT TGCACTTTGA GCCGTTCGAG
CACACCTACC GTGTCCGTTT CCGGATCGAC GGCGAATTGC GCGAAATTGC TTCGCCGCCC
GTGGCCATCA AGGAAAAACT CGCGGCACGT ATCAAGGTGA TCTCCAAGCT GGATATCTCG
GAAAAGCGGG TGCCGCAGGA TGGCAAGATG AAGCTCAAGA TCGGCCCTGA CCGCGTGATC
GATTTTCGGG TCAGCACCTT GCCCACCATG TACGGTGAAA AGGTCGTGAT CCGTATTCTG
GACCCGAGCA GTGCCAAACT GGGTATTGAC GCGCTGGGTT ACGAGCCGGT TGAGAAGGAG
CGCTTGCTGG CGGCCATCCA GCGGCCCTAT GGCATGGTGC TGGTGACCGG CCCGACCGGC
TCCGGCAAGA CAGTGTCGCT GTACACCTGC CTGAATATCC TGAACAAGCC GGGCGTCAAC
ATTGCCACGG CTGAAGACCC TGCCGAGATC ACCTTGCCAG GCGTCAACCA GGTCAGCATG
AACGACAAGG CGGGCATGAC TTTCTCTGTC GCGCTCAAGG CCTTTTTGCG TCAGGATCCG
GACATCATCA TGGTGGGTGA GATCCGCGAC ATCGAAACCG CCGACATCGC GATCAAGGCG
GCCCAGACCG GCCACATGGT CATGTCAACG CTGCATACCA ACGACGCGCC AACCACCTTG
ACCCGCATGC GCAATATGGG CATTGCGCCC TTCAATATTG CATCGAGCGT GATCCTGATC
ACGGCGCAGC GGCTGGCGCG GCGCCTGTGT GTTAACTGCA AGGCGCCCGC AGATATTCCG
CGCGAAACCT TGCTGGAGGC AGGATTCAAG GAAGAAGAAG TCGATGGTTC CTGGACGCCA
TATCGCCCGG TGGGCTGTTC CATGTGTACA AATGGTTACA AGGGTCGCGT TGGCATCTAC
CAGGTCATGC CTATTTCCGA AGAGATCCAG CGGATAGTGT TGCGCGACGG CAGCGCCCTT
GAGATTGCGG CGCAGGCAGA AGCTGAGGGT GTCAGGAGTT TGCGCCAGTC CGGCCTGTCT
AAAGTTAAAC TCGGCACGAC CTCCCTGGAA GAGGTTTTGG GTTGCACCAA TGTCTAA
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| Protein sequence | MAAVDTAINE PPALALPGLG RALVVAGKLG QKAAEDIFRK AQSGRTSFIA ELTGSGAVSA
FDLAHTMSIA FAAPLLDLEA IDVQRLPKGL LDTKICTTYR IVVLSKRNNR LIVATADPSD
QEAAEKIKFS TQMGVDWVIA EYDKLSKLVE ASSTTAAEAM ESIIGDDFEF DESSVDSGAA
EDSDASVSEV EDAPVVKFLQ KMLLDAFSMR ASDLHFEPFE HTYRVRFRID GELREIASPP
VAIKEKLAAR IKVISKLDIS EKRVPQDGKM KLKIGPDRVI DFRVSTLPTM YGEKVVIRIL
DPSSAKLGID ALGYEPVEKE RLLAAIQRPY GMVLVTGPTG SGKTVSLYTC LNILNKPGVN
IATAEDPAEI TLPGVNQVSM NDKAGMTFSV ALKAFLRQDP DIIMVGEIRD IETADIAIKA
AQTGHMVMST LHTNDAPTTL TRMRNMGIAP FNIASSVILI TAQRLARRLC VNCKAPADIP
RETLLEAGFK EEEVDGSWTP YRPVGCSMCT NGYKGRVGIY QVMPISEEIQ RIVLRDGSAL
EIAAQAEAEG VRSLRQSGLS KVKLGTTSLE EVLGCTNV
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