| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0785 |
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| Symbol | |
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| ID | 4011167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 806881 |
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| End bp | 809034 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637940463 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_547639 |
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| Protein GI | 91786687 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.113168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGC AGACATTGGC ATCAAAGGCA GGGGCGATGC GAGGCGGCCT GCAACGTTTG
CTTGGATGCG TGCTGCGTGG CGCTTCCCTG AGTGTGGCGC TGATGGCGGG CGCGCTGCCC
TCCATGGCGC AGGCGCAAAA TGCCATCCAG TCCCTTTCGG GCTCGGTGCA GGGCGGCGCG
GAAGTGATCC GCATTGATCT GGCCGAACCA CTTGCGGCCG TACCCACGGG CTTCAGTATC
CAGGCGCCTG CGCGCATCGC GCTTGACTTC CCGGGTGTCA GCAATTCCAT GGGACGCTCT
GCGGTCGACC TCAACCTCGG AAATCTGCGC TCCGCGAACG TGGTGCAGGC GGGGGAGCGG
ACGCGGGTTG TGCTCAATCT GAAGGCGCCC ACGGCCTACA AGGCCGAGAT ACAGGGCAAA
TCCTTGCTGA TCACCCTGGA GCCGGCGACT TTGGCCGCGC CCTCTGCGGC GGCGACGCCG
GTGTTTGCCG AGAGCCGCAA TCGCGACGTC CTGCCGCTCA AGGATATCGA TTTCCGCCGT
GGCGCGGACA GCGCGGGGCG CGTGGTTGTG GACCTTGCCA ACAACCAGGT CGGCGTGGAT
ATTCGCCAGC AGGGCCAGAC CCTGGTGGTC GAGTTCCTGA AAACGGCTCT GCCCGAGGGC
TTGCGCCGTC GTCTGGATGT GGCTGATTTC GGCACACCGA TCCAGACTGT CACCACGTTC
CAGACCGGTG ACAAAGTGCG AATGGTCGTG GAGCCCAGAG GCACATGGGA GCACAGTGCC
TACCAAAGCG ACAACCAGTT CGTGCTGGAA GTGCGTCCGC AGAAACTCGA CCCCAACAAG
CTCAGTCAGG GCCCTGGCTA CACCGGTGAG AAGCTGTCCC TGAATTTCCA GAATATTGAA
CTCCGCTCGC TGCTGCAAGT TATTGCGGAC TTCACCAACT TCAATATCGT TACCTCCGAT
ACCGTGACAG GTTCCGTGAC GCTACGCTTG AAAGACGTTC CCTGGGATCA GGCGCTGGAC
ATTATTTTGC AGGCCAAGGG ATTGGGCATG CGTAAAACGG GCAATGTCTT GCTGATCGCC
CCCAAGGACG AGCTTGCAGC GAAGGACAAG CAGGACCACG AGTCAAGAAA TGCCATCCAG
AGCCTGGAAG CGCTCCGTAC CCAGGACTTC AAGCTGAACT ATGCGAAGGC GACAGACATC
GCCGCGGGAT TGTTGGGCAG CAGTGGCCCA GGTGCCACCA AGATCCTGTC GGCCCGGGGT
AGCGTGATCT CGGAATCGCG TACCAATCAA CTGTTTGTGA CCGACATACC GGCCAAACTT
GAGCAGGTTC AGGCTTTGAT TGCCAAACTG GATATTCCCG TACGCCAGGT GCTGATCGAG
GCGCGCATCG TTGAGGCATC GGACACTTTC GGTAAATCGT TGGGTGTCAG GCTAGGCGGG
CGGCCATTCA CCTTGAACGG AAACCGCAAC GCCATGTTTG GCGCCACCTA CATCGCGCCG
GACATTACGG CTACATCAGG AGCAGTTCGT GGGCAGAACT TTGGAACGAC TGCGGGCGAC
TTTGTGCAGT TGCCTGGCGT CGGGCAGAAT GGCTACCCGG CATCCACTTT CGCTATCTCC
CTGTTTAACT CTTCGGTGAC AAGGTTGTTA AATCTCGAGA TTTCGGCGGC AGAAGCTGAC
GGAAAAGGAA AAATCGTGTC CAGTCCCCGC ATCGTGACGG CGGACCAGGT CAAGGCGCTG
ATCGAGCAGG GTACTGAATT GCCCTATCAG CAGGCAACCT CCAGCGGCGC GACCTCGATT
GCCTTCCGCA AGGCCAACCT GAAGCTCGAG GTAACCCCTC AGATCACGCC AGAGGGAAAC
ATCATCCTGA ATGTGGATGT CAACAAGGAC AGTGTGGGCC GGGCCACGGC CAACGGTTTT
GCCATCGACA CCAAGCACAT CCAGACGCAG GTGTTGGTGG AAAACGGCGG CACGGTGGTG
ATCGGTGGCA TTTTTGAGCA GAACGACAGG GAAGATGAGA CCAAGGTTCC CCTGCTGGGC
GACTTGCCGG CCATTGGCAA CCTGTTCAAA ACCAAAACCC GTACGGCCAG CAAGTCTGAA
CTGCTGGTGT TCATCACCCC CAAGATGCTG ACGAACGGGG CTGCGCTGCG CTGA
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| Protein sequence | MNKQTLASKA GAMRGGLQRL LGCVLRGASL SVALMAGALP SMAQAQNAIQ SLSGSVQGGA
EVIRIDLAEP LAAVPTGFSI QAPARIALDF PGVSNSMGRS AVDLNLGNLR SANVVQAGER
TRVVLNLKAP TAYKAEIQGK SLLITLEPAT LAAPSAAATP VFAESRNRDV LPLKDIDFRR
GADSAGRVVV DLANNQVGVD IRQQGQTLVV EFLKTALPEG LRRRLDVADF GTPIQTVTTF
QTGDKVRMVV EPRGTWEHSA YQSDNQFVLE VRPQKLDPNK LSQGPGYTGE KLSLNFQNIE
LRSLLQVIAD FTNFNIVTSD TVTGSVTLRL KDVPWDQALD IILQAKGLGM RKTGNVLLIA
PKDELAAKDK QDHESRNAIQ SLEALRTQDF KLNYAKATDI AAGLLGSSGP GATKILSARG
SVISESRTNQ LFVTDIPAKL EQVQALIAKL DIPVRQVLIE ARIVEASDTF GKSLGVRLGG
RPFTLNGNRN AMFGATYIAP DITATSGAVR GQNFGTTAGD FVQLPGVGQN GYPASTFAIS
LFNSSVTRLL NLEISAAEAD GKGKIVSSPR IVTADQVKAL IEQGTELPYQ QATSSGATSI
AFRKANLKLE VTPQITPEGN IILNVDVNKD SVGRATANGF AIDTKHIQTQ VLVENGGTVV
IGGIFEQNDR EDETKVPLLG DLPAIGNLFK TKTRTASKSE LLVFITPKML TNGAALR
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