Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0780 |
Symbol | |
ID | 4011162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 801194 |
End bp | 803608 |
Gene Length | 2415 bp |
Protein Length | 804 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637940458 |
Product | penicillin-binding protein 1A |
Protein accession | YP_547634 |
Protein GI | 91786682 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCCA AGCCCTCCTC TTCGAACTCA AACTCCCACG CGGTGATGCA GCCCTCCTGG CAACGCTGGC TGATCAAGCT GGTTTTGTGG GGCGCCGGGC TGGCAGTCGC GGGGGTGGTC GGCATCCTTC TGTTTGTAGC CGTCGCCCTG TCGGTGGCCT ACCCCAACCT GCCGGACATC TCGGATTTGC TGGACTACCG GCCCAAGTTG CCGCTGCGTG TGTATTCCGC AGATGGCGTG GTGATTGGCG AGTTTGGCGA AGAACGCCGC AACCTCACGC CCATCAAAGA CATCCCCCAG GTCATGAAGG ACGCCGTGCT GGCGATCGAA GATGCCCGCT TTTTTTCGCA TGGCGGCGTG GACTATCTTG GTGTGATCCG CGCCGGCTTT GCCAATGTGG GCCGTGCAAA AAGCCAGGGC GCCTCCACCA TCACCATGCA GGTGGCCCGC AATGTGTACC TGTCTGCCGA AAAGAGCTAT ACGCGCAAGA TTTATGAAAT CCTGCTGACG TTCAAGCTGG AGCACCTGCT GACCAAGGAT CAGATCCTCG AAATCTACAT GAACCAGATT TTTCTGGGAA ACCGGGCCTA CGGCTTTGCC GCGGCTTCGG AGGCCTACTT TGGCAAGCCC CTCAAAAACA TCTCGATCGC CGAAGCCGCC ATGCTGGCCG GCCTGCCCAA AGCGCCCTCG GCGTACAACC CGATCGTCAA CCCCAAGCGC GCGAAAGCCC GCCAGCTCTA CATCATTGAG CGCATGCAGG AGAACGGCTT CATCACGGCA GAGCAGGCCA AGGCAGCCAA AGAGGAAGAG CTCCAGGTCA GGGTCGGGCG CGATAACGGC CGGGTGCATG CCGAATATGT CGCTGAAACC GTACGCCAGC TGGTCCATAA CCAGTATGGC GACGAAACCT ATACACGCGG CCTCAATGTC TACACCACCT TGCGCGCCGC CGACCAGACA GTAGCTTACA AGGCCTTGCG CAAGGGCATC ATGGACTACG AGCGCCGGCA AATTTACCGC GGTCCTGAGA AGTTCATCGA CCTTCCGGCC AACCCGCAGG AGACGGAAGA TGCGATTGAC GACGCACTGA CCGACAACCC CGACAACGGC GACGTGATGT CGGCGGTGGT GCTGGAAGCC ACTCCCAAGC GGATTCTCGC GATGCGCCAG AACAGCGAGA CGGTTGAAAT CACCGGCGAA GGGCTTCGGC CGGCGCAATC CGGCCTGGCC GACAAGGCGG GCCCCAGCAT CAAAATTCGC CGTGGCGCCC TGATCCGGGT GGCCAAAACG CCAAAAAACA CCTGGGAGAT CACCCAGCTG CCTGAGGTCG AAGGGGCTTT TGTGGCGCTG GACCCGCGTG ATGGCTCCAT TCGCGCGCTG GTGGGCGGGT TTGATTTTGA GAAGAACAAG TTCAACCATG TGACCCAGGC CTGGCGGCAA CCGGGCTCCA GCTTCAAGCC CTTCATCTAT TCGGCTGCCC TGGAAAAAGG CTTCACGCCG GCCACCGTGG TCAACGACGC GCCCCTGTTT TTTGACGCCG GCGTGACCGG CGGCCAGCCA TGGGAGCCCA AGAACTATGA CGGCACCTTC GAGGGGCCCA TGAATTTACG GACCGGCCTG AAAAAATCAA AAAACATGAT TTCCATCCGC ATTCTGCAGT CGGTGGGCGC GCAGTATGCA CAGGACTGGA TCACCCACTT CGGCTTTGAA GCTGAAAAAC ATCCGGCGTA CCTGACCATG GCACTGGGCG CCGGCTCCGT CACGCCCATG CAAATGGCCA CGGCTTATTC GGTGTTTGCC AATGGCGGCT ACCGCGTCAA CCCCTACCTG GTGACCAAGA TCACCGACCA GCGCGGCAAG GTGCTGCTCG AAACCACACC GCCCGTCCTG GATGAGTCCG CCAGGGCCAT CGATGCCCGC AACGCCTTCA TCATGGACAG CCTGTTGCAG GAAGTGGCGC GCTCAGGCAC AGCCGCCAGA GCGCAGGCGA CCCTCAAGCG CCCCGACCTC TTCGGTAAAA CCGGTACCAC CAATGACTCG ATCGATACCT GGTTCGTCGG CTTCCAGCCC ACCCTGGCGG CAGCCGTCTG GATGGGTTAC GACACGCCCA AAAAGCTTGG CGATCGGGAA ACCGGCGGCG GCCTGAGCCT GCCGATCTGG ATCAACTTCA TGGAATACGC CCTGAAAGGC GTGCCGGTCA CCGAATACCC GGCGCCCGAA GGCGTGGTGA ATGTCAATGG CGAGTGGTAC TACAACGAGT ACGCCAGGGG CTCGGGGGTG AGCAGCGTGG GAACGCAGGA TCCGGCAGCG GTCAACGCCG GCCAACTGCC CGCCCCGGGC ACGCCGGGCG GCCCGATTCA GGTCTTGCCA CCCTCTGACG AAAAGAAACG GATTCTGGAT CTGTTCAAGA ACTGA
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Protein sequence | MSSKPSSSNS NSHAVMQPSW QRWLIKLVLW GAGLAVAGVV GILLFVAVAL SVAYPNLPDI SDLLDYRPKL PLRVYSADGV VIGEFGEERR NLTPIKDIPQ VMKDAVLAIE DARFFSHGGV DYLGVIRAGF ANVGRAKSQG ASTITMQVAR NVYLSAEKSY TRKIYEILLT FKLEHLLTKD QILEIYMNQI FLGNRAYGFA AASEAYFGKP LKNISIAEAA MLAGLPKAPS AYNPIVNPKR AKARQLYIIE RMQENGFITA EQAKAAKEEE LQVRVGRDNG RVHAEYVAET VRQLVHNQYG DETYTRGLNV YTTLRAADQT VAYKALRKGI MDYERRQIYR GPEKFIDLPA NPQETEDAID DALTDNPDNG DVMSAVVLEA TPKRILAMRQ NSETVEITGE GLRPAQSGLA DKAGPSIKIR RGALIRVAKT PKNTWEITQL PEVEGAFVAL DPRDGSIRAL VGGFDFEKNK FNHVTQAWRQ PGSSFKPFIY SAALEKGFTP ATVVNDAPLF FDAGVTGGQP WEPKNYDGTF EGPMNLRTGL KKSKNMISIR ILQSVGAQYA QDWITHFGFE AEKHPAYLTM ALGAGSVTPM QMATAYSVFA NGGYRVNPYL VTKITDQRGK VLLETTPPVL DESARAIDAR NAFIMDSLLQ EVARSGTAAR AQATLKRPDL FGKTGTTNDS IDTWFVGFQP TLAAAVWMGY DTPKKLGDRE TGGGLSLPIW INFMEYALKG VPVTEYPAPE GVVNVNGEWY YNEYARGSGV SSVGTQDPAA VNAGQLPAPG TPGGPIQVLP PSDEKKRILD LFKN
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