| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0687 |
|---|
| Symbol | |
|---|
| ID | 4011439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 700604 |
|---|
| End bp | 701539 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637940367 |
|---|
| Product | dihydrodipicolinate synthetase |
|---|
| Protein accession | YP_547543 |
|---|
| Protein GI | 91786591 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0101529 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCCCA AACGACCTGA CGCTTTTCAA GGCATCTATG CCGCCACCCT GTGCCCGCTG
CATGGCGATG GCCGCATCGA TGAGACCACG CTGGCGCGCC ACCTGGAGGC CAACGCCTTC
GTTCCAGGCA TGACGGGCCT GCTCATCAAC GGCCATGCCG GCGAGAATTT CTCGCTCTCT
CGCGAAGAGA AGCGCCGCGT GACCGAGATC GCCTTCGAGG TCTGTGGCCA CCACGCCATT
CTCGTCTGCG GCATCAACGC CGAAGACAGC CTCGAGGCTC AGCGCCACGT CGACGACGCC
AAGGCCGCCG GCGCCGACGC GGTGCTGGTC TTCCCGCCGT TCTCCTGGGC GCTCTCGCAG
GATTCGCGCA TGGCCGTGAC GCATCACCGG ACGGCCAATG CCAACGCACA GATGCCCTTG
ATGCTCTACC AGGCCGGCAT CAATGCAGGC GCGATGGCCT ATCGCCCCGA GGTGCTGGCC
GAGCTCGCGC AATTGCCCCA CGTGGTCGGC GTCAAGGAGG GCAGCTGGGA GACCGCGGCC
TACGAGGCCA ACCGCCGCCT CGTGAAGCGC GTGGCGCCGC ACGTGGCCAT GATGGCCTCG
GGTGACGAGC ATCTGTTCAC CTGCTTCGCC ATCGGCAGCG ACGGCAGCCT CGTGAGCCTG
GCCGCCGTAG TGCCCGAGCT CGTGATCGCG CTCGACCAGG CGATCCAGCG CAAGGACCTC
GACGAGGCGC GCCGCCTGAA CGAGCGCATC TATCCGCTTG CCAAGGCGAT CTACGGCACC
CCGCCCGGCG GCTATGCGAC GGCGCGGCTC AAGACCTGCC TGAGGTTGCT CGGCCGCTTT
CCGAGCGACG CCATGCGGCC GCCGATCGGG CTGCTTCCGG CCGAAGAGGT CGCCGCACTG
GAGCGTGCGC TGGCCGAAGC CGGCGTCGGC GCGTAA
|
|---|
| Protein sequence | MIPKRPDAFQ GIYAATLCPL HGDGRIDETT LARHLEANAF VPGMTGLLIN GHAGENFSLS
REEKRRVTEI AFEVCGHHAI LVCGINAEDS LEAQRHVDDA KAAGADAVLV FPPFSWALSQ
DSRMAVTHHR TANANAQMPL MLYQAGINAG AMAYRPEVLA ELAQLPHVVG VKEGSWETAA
YEANRRLVKR VAPHVAMMAS GDEHLFTCFA IGSDGSLVSL AAVVPELVIA LDQAIQRKDL
DEARRLNERI YPLAKAIYGT PPGGYATARL KTCLRLLGRF PSDAMRPPIG LLPAEEVAAL
ERALAEAGVG A
|
|---|
| |