Gene Bpro_0657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_0657 
Symbol 
ID4011117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp668626 
End bp669567 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content63% 
IMG OID637940338 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_547514 
Protein GI91786562 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.18227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAT ATTTGTTGTC ACGCATCATG GGCATGCTGG TCGTCATGGC GCTCGTGGCG 
GTCCTCGTGT TTGTGCTCAC GCGCGCCGCG TCGGGTGACC CCGTCACGGT GCTGCTGGGC
GACCAGGCCA CGGCCGAAGA CATTGCCCGC GTACAAAAAG AGTATGGCCT GGACAAACCG
CTGCCGGTGC AGTTCGGCTA CTGGCTCAAG GAGCTGTCGC AGGGCAACCT CGGGCAGTCC
ATTTTTTTGC AGCGCCCGGT CACGCAGGCG CTGTGGGAGC GGGCCGAGCC CACGACCCTG
CTGGCGCTGC TGTCCCTCTT CATCGCCGCG GCGATTGGTG TGCCTTGCGG CATTGTCTCG
GCGGTCTTTC GCGGCAAGTT CATCGACCAG CTGCTCACCG GTTTTGCCAT GCTGGGTGCC
AGCATTCCCA GCTTCTGGTT CGGCTTGGTG CTGATGCAGA TTTTTGCGGT GTCCATGGGC
TGGTTTCCGG TGTCCGGCTA CGGTGACCCG GGTGCCACCT TGATGGCGCG CATCCATTAC
CTGGTGCTGC CTTCGGTGGT GCTGGGCGTG CTCAACTCCG CGCTGATCAT CCGCTTCACG
CGCGCTTCCA TGCTCGACGT GCTGGGTGAA GACTATGTGC GCACGGCCCG GGCCAAGGGC
CTGTCTGAAA AAGTCGTCGT GCTCAAGCAT GCGCTGCGCA ACGCGCTGGT GCCCATCGTC
ACGGTGTTGG GCCTGACCGT GGCGCTGCTG ATCGGCGGCG CGGTGGTGAC CGAAACCGTG
TTTGGCCTGC CGGGTGTCGG CAACCTGGTG GTGAGCGCCG TGCTGCGCCG CGATTACCCG
GTGATTCAGG GTGCCCTGCT GGTCGTTTCC ATGATTTATG TGGTGATCAA TTTCCTGACC
GACCTGCTTT ATATGGTGGT CGATCCCCGC GTCAAATACT GA
 
Protein sequence
MTRYLLSRIM GMLVVMALVA VLVFVLTRAA SGDPVTVLLG DQATAEDIAR VQKEYGLDKP 
LPVQFGYWLK ELSQGNLGQS IFLQRPVTQA LWERAEPTTL LALLSLFIAA AIGVPCGIVS
AVFRGKFIDQ LLTGFAMLGA SIPSFWFGLV LMQIFAVSMG WFPVSGYGDP GATLMARIHY
LVLPSVVLGV LNSALIIRFT RASMLDVLGE DYVRTARAKG LSEKVVVLKH ALRNALVPIV
TVLGLTVALL IGGAVVTETV FGLPGVGNLV VSAVLRRDYP VIQGALLVVS MIYVVINFLT
DLLYMVVDPR VKY