Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0627 |
Symbol | |
ID | 4011418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 634602 |
End bp | 635315 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637940308 |
Product | protocatechuate 3,4-dioxygenase, beta subunit |
Protein accession | YP_547484 |
Protein GI | 91786532 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.799522 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCG AACTTGACAG CAGCTATCTC GCCCCGCGCG ACTGGACCGG CCACCCGTCG CATATTTACC CGTACTACAA ATCAACCATG CTGCGCGGCC CCAAGCAGCC GCTGGTGCCC ATCAAGCAGG CGCTGGCCCA GCTCAACGCG CCGGTCTACG GTAGCGATCA GCTCGGCCCG CTCGACCATG ACCTGACCAA AAACGCGGTC AAAAATGGCG AGCCGCTGGG CGAACGCATC ATCGTCACCG GCCGCGTGTC GGACGAAGAC GGCCGCCCCG TGCGCAACAC GCTGGTTGAA GTCTGGCAGG CCAATGCCGC CGGCCGCTAT GTGCACAAGG TGGACCAGCA CCACGCGCCT CTGGACCCCA ATTTCCTGGG CGCCGGCCGC TGCATGACCG ATAGCGATGG CCGCTACACC TTCATGACCA TCAAGCCCGG CGCCTACCCC TGGGGCAACC ATCCCAACGC CTGGCGGCCG CAGCATATTC ACTTCTCGCT GTTCGGCGAC TACTTTGCCA GCCGCCTGGT GACGCAGATG TATTTCCCCG GCGACCCGCT GTTTGCCTAC GACCCGATGT ACCAGGGCGT GCCGCCCGAC TCGCGCGAAT TGATGGTGGC CAAGTTCAGC CTCGACGTCA CCCAGCCCGA CTTTGCGCTG GGCTATGTGT TTGACATCGT GCTGCGCGGC CCCAAGGCTA CGCGTTTCGA ATAA
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Protein sequence | MSTELDSSYL APRDWTGHPS HIYPYYKSTM LRGPKQPLVP IKQALAQLNA PVYGSDQLGP LDHDLTKNAV KNGEPLGERI IVTGRVSDED GRPVRNTLVE VWQANAAGRY VHKVDQHHAP LDPNFLGAGR CMTDSDGRYT FMTIKPGAYP WGNHPNAWRP QHIHFSLFGD YFASRLVTQM YFPGDPLFAY DPMYQGVPPD SRELMVAKFS LDVTQPDFAL GYVFDIVLRG PKATRFE
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