Gene Bpro_0627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_0627 
Symbol 
ID4011418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp634602 
End bp635315 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content64% 
IMG OID637940308 
Productprotocatechuate 3,4-dioxygenase, beta subunit 
Protein accessionYP_547484 
Protein GI91786532 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3485] Protocatechuate 3,4-dioxygenase beta subunit 
TIGRFAM ID[TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.799522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG AACTTGACAG CAGCTATCTC GCCCCGCGCG ACTGGACCGG CCACCCGTCG 
CATATTTACC CGTACTACAA ATCAACCATG CTGCGCGGCC CCAAGCAGCC GCTGGTGCCC
ATCAAGCAGG CGCTGGCCCA GCTCAACGCG CCGGTCTACG GTAGCGATCA GCTCGGCCCG
CTCGACCATG ACCTGACCAA AAACGCGGTC AAAAATGGCG AGCCGCTGGG CGAACGCATC
ATCGTCACCG GCCGCGTGTC GGACGAAGAC GGCCGCCCCG TGCGCAACAC GCTGGTTGAA
GTCTGGCAGG CCAATGCCGC CGGCCGCTAT GTGCACAAGG TGGACCAGCA CCACGCGCCT
CTGGACCCCA ATTTCCTGGG CGCCGGCCGC TGCATGACCG ATAGCGATGG CCGCTACACC
TTCATGACCA TCAAGCCCGG CGCCTACCCC TGGGGCAACC ATCCCAACGC CTGGCGGCCG
CAGCATATTC ACTTCTCGCT GTTCGGCGAC TACTTTGCCA GCCGCCTGGT GACGCAGATG
TATTTCCCCG GCGACCCGCT GTTTGCCTAC GACCCGATGT ACCAGGGCGT GCCGCCCGAC
TCGCGCGAAT TGATGGTGGC CAAGTTCAGC CTCGACGTCA CCCAGCCCGA CTTTGCGCTG
GGCTATGTGT TTGACATCGT GCTGCGCGGC CCCAAGGCTA CGCGTTTCGA ATAA
 
Protein sequence
MSTELDSSYL APRDWTGHPS HIYPYYKSTM LRGPKQPLVP IKQALAQLNA PVYGSDQLGP 
LDHDLTKNAV KNGEPLGERI IVTGRVSDED GRPVRNTLVE VWQANAAGRY VHKVDQHHAP
LDPNFLGAGR CMTDSDGRYT FMTIKPGAYP WGNHPNAWRP QHIHFSLFGD YFASRLVTQM
YFPGDPLFAY DPMYQGVPPD SRELMVAKFS LDVTQPDFAL GYVFDIVLRG PKATRFE