| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0624 |
|---|
| Symbol | |
|---|
| ID | 4011415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 631859 |
|---|
| End bp | 632263 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637940305 |
|---|
| Product | RNA recognition motif-containing protein |
|---|
| Protein accession | YP_547481 |
|---|
| Protein GI | 91786529 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.478927 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAACA AACTTTACGT CGGCAACCTG CCTTACACAG TGCGCGACGA AGATCTGCAA
CAATCTTTTG GCGCTTTCGG CTCCATCACC AGCGCCAAAG TCATGATGGA ACGCGACACG
GGTCGCTCCA AAGGCTTTGG TTTTGTCGAA ATGGGCAGCG ATGCCGAAGC GCAAGCCGCA
ATTGCCGGCA TGAATGGCCA GTCTCTTGGC GGCCGTAGCA TCACCGTGAA CGAAGCACGC
CCCATGGAAG CACGCCCTCC CCGCACCGGC GGCTTTGGCG GTGGTGGTGG TTACGGCGGC
GGTGGCGATC GCTCTGGCGG CGGTGGCTAC GGCGGCGGCG GTGGTGGCCG TTCTGGCGGT
GGTGGCTATG GCGGCGGCAG CGGTGGTGGC CGCGGCGGCT ACTAA
|
|---|
| Protein sequence | MGNKLYVGNL PYTVRDEDLQ QSFGAFGSIT SAKVMMERDT GRSKGFGFVE MGSDAEAQAA
IAGMNGQSLG GRSITVNEAR PMEARPPRTG GFGGGGGYGG GGDRSGGGGY GGGGGGRSGG
GGYGGGSGGG RGGY
|
|---|
| |