| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0581 |
|---|
| Symbol | |
|---|
| ID | 4011333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 584752 |
|---|
| End bp | 586140 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637940263 |
|---|
| Product | MmgE/PrpD |
|---|
| Protein accession | YP_547439 |
|---|
| Protein GI | 91786487 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCTC CCACCGCCCA GCTGGCCGCG TTTGCCGCCA GCCTGACTTT CGAGGCCATT
CCCGCGCCGG TGGTGCGCAA GGCCGAAGAC CTGCTGGTCG ACTGGTTCGG CTCGGCGCTT
GCCGGAAAGG GCGCGCGCCC GGTGGAGACC ATCGCGCGCT TTGCCGCGCA GATGGGGCCG
CAGCCAACGC GCAGCGGCAG CGCGCTGCCC GCCGGCGCCT CCGAAGTGCT GATCAACCGC
AGCTGCACCA GCCCCTACCT GGCGGCCATG GTCAACGCGG CCGCCTCGCA TGTGGCCGAG
CAGGACGACG TCCACAATGG CTCGGTGTTT CACCCCGCCA CGGTGGTGTT TCCGGCGGCG
CTGGCGGTGG CCCAGGCGCT GGGCGCCAGC GGCCGGCAGC TGCTGACGGC CTCGGTGGCA
GGCTACGAGG TCGGGATCCG GGTGGGCGAG TTCCTGGGCC GCTCGCATTA CAAGGTGTTC
CACACCACCG GAACGGCCGG CACGCTGGCC GCCGCCGCAG CGGTGAGCCA TCTGCTGGGG
CTCACGGCGC AGCAGATGCG GCACGCCTTC GGTTTGGCCG GCACGCAGTC GGCCGGCCTG
TGGGAATTCC TGCGTACCGC GGCCGACTCC AAGCAGCTGC ACACCGCGCA TGCCGCCGCC
GCGGGGCTGA TGTCGGCCTA CCTGGCGCAG GGCGGCTTTA CCGGGGCGGC GCAGATCTTC
GAAGGCCCGC AGGGCATGGC GGCCGGCATG TCGAGCGATG CCGACCCCGC CCGGCTCACC
GCGGGTCTCG GCACCCGCTG GGCCACGGCC GAAACCTCGT TCAAGTACCA CGCCTCGTGC
CGCCACACGC ACCCGGCCGC CGACGCGCTG CTGCAGGTGA TGCAAACCCA CCACCTCCGG
CCCGACGACC TGGCCAGCGT GGTCACCCAT GTGCATCAGG GCGCCCTTGA CGTCCTCGGG
CCGGTGACGC ATCCCGCCAC CGTGCACCAG AGCAAATTCT CCATGGGCAC GGTGCTGGCG
CTGGTGGCGC GCTTCAAGCA CGCCGGCCTG GCCGAGTTCG ACCAGCACTT CGACGATGCC
GCCACGCAAA GCCTGCGCGA CCGTGTGAGC ATGGTGCTGG ACGCCGAAGT GGACCGCGCC
TACCCGCAGC GCTGGATTGG TAAGGTCACG GTGACCACGA CCGATGGCCG GGTGCTGCAG
GGCCGCGTCG ATGAGCCCAA GGGCGACCCC GGCAACACCC TCAGCCGCGA GGAGATCACC
GCCAAGGCCT TGCGGCTGGC GGCTTACAGC AGTGCCGCCG CGCCCGCCGA CATGCAGGCA
GCCATCGATG GCCTGTGGGC GGTGGCGCAG TGCCCGCGGC TCGGGCCGCT GCTCGGAGGT
GTGGCATGA
|
|---|
| Protein sequence | MSSPTAQLAA FAASLTFEAI PAPVVRKAED LLVDWFGSAL AGKGARPVET IARFAAQMGP
QPTRSGSALP AGASEVLINR SCTSPYLAAM VNAAASHVAE QDDVHNGSVF HPATVVFPAA
LAVAQALGAS GRQLLTASVA GYEVGIRVGE FLGRSHYKVF HTTGTAGTLA AAAAVSHLLG
LTAQQMRHAF GLAGTQSAGL WEFLRTAADS KQLHTAHAAA AGLMSAYLAQ GGFTGAAQIF
EGPQGMAAGM SSDADPARLT AGLGTRWATA ETSFKYHASC RHTHPAADAL LQVMQTHHLR
PDDLASVVTH VHQGALDVLG PVTHPATVHQ SKFSMGTVLA LVARFKHAGL AEFDQHFDDA
ATQSLRDRVS MVLDAEVDRA YPQRWIGKVT VTTTDGRVLQ GRVDEPKGDP GNTLSREEIT
AKALRLAAYS SAAAPADMQA AIDGLWAVAQ CPRLGPLLGG VA
|
|---|
| |