| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0554 |
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| Symbol | |
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| ID | 4011286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 553244 |
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| End bp | 553774 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637940236 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_547412 |
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| Protein GI | 91786460 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.29193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACGG AAACAATCGC GCTTGAACCG GTCGTGCCCG CAGGCTGGGC CGGGCGCGCA
CTCGACGGGC TGAACCGGCT CATCACCGGC GTGCTGCTCG CCACGGTAGC GGTGATGGTG
AGCGTCGTGT CGGCGCAGGT TGCGCTGCGC TATGGCTTGA ATCGCTCGAT CGACTGGGCC
GACGAGATCG GACGCCTGGC TTTCGTCTGG TCCATCTTTC TGGCGATCCC GCTGGGGGTG
CGCCAGGGCG CGCATATTGG CATCGACATC ATGGTCGACA AGTTGCCAGC CCGCTGGCGC
GGCGCGCTCA AGCGGGCCGG CGCGGCCCTG TGCGCCGCCA TGATGTTTGC GATTGCCTGG
GCGGCCTTCC GTGTGGCGCG CGAGCAATGG GATGAACTGA TGGCGACGGT GGACTGGAGT
GTCGGCTGGT TCATTGTGCC GGTGGGCCTG GGCGCGCTGC TGAGCGCGCT GCACCTGGTG
CGCATCGTCA TCGCGGGTGC GCCTGTGCAG GCGCTGGGGA GTGCCGAATG A
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| Protein sequence | MTTETIALEP VVPAGWAGRA LDGLNRLITG VLLATVAVMV SVVSAQVALR YGLNRSIDWA
DEIGRLAFVW SIFLAIPLGV RQGAHIGIDI MVDKLPARWR GALKRAGAAL CAAMMFAIAW
AAFRVAREQW DELMATVDWS VGWFIVPVGL GALLSALHLV RIVIAGAPVQ ALGSAE
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