| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0500 |
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| Symbol | rpsD |
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| ID | 4010980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 509909 |
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| End bp | 510532 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637940185 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_547362 |
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| Protein GI | 91786410 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCACGCT ATCTCGGCCC CAAGGCCAAA CTATCCCGCC GTGAAGGCAC CGACCTTTTC
CTGAAGAGCG CACGTCGCGC CATCAGCGAC AAGGCCAAAT TTGATTCGAA GCCTGGCCAG
CACGGTCGTA CTTCGGGTAC CCGTACTTCC GACTTCGGCC TGCAGCTGCG CGAAAAGCAG
AAGGTCAAGC GCATGTACGG CGTGCTGGAG AAGCAGTTCC GCCGCTATTT CGAGGAAGCC
GATCGCCGCA AGGGCAACAC CGGCGCCAAT CTGCTGTTCA TCCTCGAATC GCGCCTGGAC
AACGTCGTGT ACCGCATGGG CTTCGGCTCG ACACGCGCCG AAGCGCGCCA GCTGGTTTCA
CACAAAGCCA TCACGGTGAA CGGCAATTCG GTCAATATTC CTTCTTACAT GGTCAAGACC
GGTGATGTGA TCGCCGTACG TGACAAGTCC AAGAAGCAGA CTCGCGTCAC CGAGGCGCTT
GAGCTGGCAA AACAGGTCGG ACTGCCTGCC TGGGTCGATG TGAACGCCGA CAAGGGCGAA
GGCGTCTTCA AGAAGGTGCC CGATCGCGAC GAATTTGCAG CCGACGTCAA CGAATCGTTG
ATCGTCGAGT TGTACTCGCG CTAA
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| Protein sequence | MARYLGPKAK LSRREGTDLF LKSARRAISD KAKFDSKPGQ HGRTSGTRTS DFGLQLREKQ
KVKRMYGVLE KQFRRYFEEA DRRKGNTGAN LLFILESRLD NVVYRMGFGS TRAEARQLVS
HKAITVNGNS VNIPSYMVKT GDVIAVRDKS KKQTRVTEAL ELAKQVGLPA WVDVNADKGE
GVFKKVPDRD EFAADVNESL IVELYSR
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