| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0420 |
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| Symbol | |
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| ID | 4011560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 433121 |
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| End bp | 434182 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637940105 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_547282 |
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| Protein GI | 91786330 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCCT TCTTTGCCGA CGACCAGCTG CTGCACGACC CGCAGCAGTT CATGCGGCTG
GGCCGGATCT GCAAGCCGAC CGACCTGCCG GCCCGGGCCC ACGCCCTGCA GGCCGCGCTG
GCAGCCCATG GCATAGCCGT GGCCACGCCG CCGGACTATG GGCGCGCCCC ACTGGAGACC
GTGCACAGCA CCGACTACCT CGACTTCCTG GAGGGTGCCT ACGCGCGCTG GACGGCCGTG
AAGCTGCCCG GGCTCGAACC CGGCATCGAG GTGCTGCCCA ACCTGTCGCC GTATTGCAGC
GGCCATGTCA ATGCGGCGCG CGGGCCGTGC CCGTCGCCCT CCGTCGTGGC CCAGGCGGGT
TACTACCTGC GCGACCTGTC CTGCCCCATC GGTCCCCACA CCTGGCATTC GGTGCTGCGC
TCGGCGCACA GTGCCGTGGC CGCCGCCGAC GCGGTGTGCC AGACCGGTGA CGCCGCCTAT
GCACTGTGCC GTCCCTCGGG CCACCATGCC TGCCGCGACA GCGCCAGCGG CTTTTGCTAC
GTGAACAACA GCGCCTGTGC CGCGCACCGG CTGCTGCAGC ACTACGGCCG CGTGGCGGTG
CTCGACGTGG ACGCCCACCA CGGCGACGGC ACCCAGCACA TCTTCTACGA CAGCGCCGAC
GTGCTGACCG TGTCGATGCA CGCCGACCCG GCCGGCTACT ACCCGTTCTA CAGCGGCTAC
GCACACGAGC GCGGCGCCGG GGCCGGCGCG GGCTGCAACC TGAACCTGCC GCTGCCGCAC
GGCGCCGGCA GCGAGCCCTT CCTGCAGGCG CTGGATGCGG GGCTGGCGGC GCTGCGCGAC
TTCGCTCCAC GGGCGCTGGT GCTGCCGCTC GGCTTCGACA CCTACAAGGA CGATCCGGTG
AGCGTGCTCA AGGTCGAGAT CGATGCCTAC CGCCAGGTCG GCGAACGAGC CGGGGCGCTG
GGCCTGCCCA CGGTGATCGT GCAGGAGGGC GGCTACAAGG TGGACGCCAT GGGCATGGCG
CTGGACGCAT TTCTTGGTGG TTTTCAGGCA GGCCGATCAT GA
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| Protein sequence | MQAFFADDQL LHDPQQFMRL GRICKPTDLP ARAHALQAAL AAHGIAVATP PDYGRAPLET
VHSTDYLDFL EGAYARWTAV KLPGLEPGIE VLPNLSPYCS GHVNAARGPC PSPSVVAQAG
YYLRDLSCPI GPHTWHSVLR SAHSAVAAAD AVCQTGDAAY ALCRPSGHHA CRDSASGFCY
VNNSACAAHR LLQHYGRVAV LDVDAHHGDG TQHIFYDSAD VLTVSMHADP AGYYPFYSGY
AHERGAGAGA GCNLNLPLPH GAGSEPFLQA LDAGLAALRD FAPRALVLPL GFDTYKDDPV
SVLKVEIDAY RQVGERAGAL GLPTVIVQEG GYKVDAMGMA LDAFLGGFQA GRS
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