| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0396 |
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| Symbol | |
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| ID | 4011575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 408468 |
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| End bp | 409511 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637940081 |
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| Product | twitching motility protein |
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| Protein accession | YP_547258 |
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| Protein GI | 91786306 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.203182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCA CGCAGCTGCT GGCCTTTAGC GTCAAAAACA AGGCGTCCGA CTTGCATCTG
TCGGCAGGTT TGCCGCCCAT GATCCGCGTT CATGGCGACG TGCGGCGCAT CAACATCGAC
CCGCTGGACC ACAAGCAGGT GCATGCCATG GTGTACGACA TCATGAACGA CACCCAGCGC
AAGAACTATG AAGAGTTCCT GGAGGTGGAC TTCTCCTTTG AGATTGACGG ACTGGCACGC
TTTCGCGTCA ATGCCTTCAA CCAGAACCGG GGTGCCGGTG CCGTGCTACG AACCATTCCC
TCCAAAATCC TGACGCTGGA GCAGCTCAAC GCGCCCAAGA TCCTTGGCGA CCTGGCGCTC
AAGCCGCGCG GCATGGTGCT GGTGACCGGC CCGACCGGCT CGGGCAAGTC CACCACGCTG
GCGGCCATGG TCAACTTCCT GAATGAAACC GAGTACGGCC ACATCCTCAC GGTGGAAGAC
CCGATCGAGT TTGTGCACGA GTCCAAGAAA TGCCTGATCA ACCAGCGCGA GGTCGGCCCG
CACACGCTGA GCTTCAACGC CGCTCTCAAG TCCGCCCTGC GCGAAGACCC GGACGCGATT
CTGGTGGGCG AGATGCGCGA CCTGGAAACC ATTCGCCTGG CCATGTCGGC CGCAGAGACC
GGCCACCTGG TCTTCGGCAC GCTGCACACG TCAAGCGCCG CCAAGACGAT TGACCGCATC
ATCGACGTGT TCCCGGCCGA GGAAAAGGAA ATGATCCGCT CCATGCTGTC GGAGTCGCTG
CAGGCCGTCA TTTCGCAAAC GCTGTGCAAG ACCAAGGACG GCGCGGGCCG CGTGGCCGCG
CACGAAATCA TGCTGGGCAC CAGCGCCATC CGCAACCTGA TCCGTGAGGC GAAGGTCGCG
CAGATGTACT CGTCCATCCA GACCGGCAAC AGCGTGGGCA TGCAAACGCT GGACCAGAAC
CTGACCGAGC TGGTCAAGCG CAACGTGATT TCGCCCGCGG AAGCGCGCGG CAAGGCGAAA
ATACCGGAAA ACTTTCCAGG CTAG
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| Protein sequence | MDITQLLAFS VKNKASDLHL SAGLPPMIRV HGDVRRINID PLDHKQVHAM VYDIMNDTQR
KNYEEFLEVD FSFEIDGLAR FRVNAFNQNR GAGAVLRTIP SKILTLEQLN APKILGDLAL
KPRGMVLVTG PTGSGKSTTL AAMVNFLNET EYGHILTVED PIEFVHESKK CLINQREVGP
HTLSFNAALK SALREDPDAI LVGEMRDLET IRLAMSAAET GHLVFGTLHT SSAAKTIDRI
IDVFPAEEKE MIRSMLSESL QAVISQTLCK TKDGAGRVAA HEIMLGTSAI RNLIREAKVA
QMYSSIQTGN SVGMQTLDQN LTELVKRNVI SPAEARGKAK IPENFPG
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