Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0262 |
Symbol | rpsC |
ID | 4011708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 282218 |
End bp | 283123 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637939946 |
Product | 30S ribosomal protein S3 |
Protein accession | YP_547125 |
Protein GI | 91786173 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.155433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACAAA AAATCAACCC AACCGGGTTT CGCCTCGCAG TTAGCCGCAA CTGGGCCAGC CGCTGGTACG CAAGCAACCG TGATTTTGCC GGCATGCTGG CAGAAGACAT CAAGGTGCGC GAGTACCTCA AGGCCAAGCT GAAGAACGCC GCGGTTTCGC GCGTTCTGAT CGAGCGCCCC GCCAAGAATG CCCGCATCAC GATTTTCTCG GCACGTCCGG GCGTCGTGAT CGGCAAAAAA GGCGAGGACA TCGAGAACCT CAAGAAAGAA CTGAGCCGCC AGCTGGGCGT GCCGGTCGCC GTGAACATTG AAGAAGTCCG CAAGCCTGAA ATTGATGCCA AGCTCATCGC TGACAGCATC ACGCAACAGC TTGAAAAACG CATCATGTTC CGCCGTGCGA TGAAGCGCGC CATGCAAAAC GCCATGCGTC TGGGTGCCCT GGGCATCAAG ATCATGTCGT CGGGCCGCCT CAATGGCATT GAAATCGCCC GTTGCGAGTG GTACCGCGAA GGTCGCGTGC CGCTTCACAC CCTGCGCGCC GACATCGACT ACGGCACCTC TGAAGCCAAG ACCACTTATG GTGTGATCGG CGTCAAGGTC TGGGTCTACA AAGGCGACAC GCTGGGCCGT GGCGAATCAC CCGGCGCCAA ACTGGATGCC GCTCCTTCTG ACGAAGAGCG CAAGCCTCGC GGCCCGCGTC GTGACGCCCG TCCTGGTTCT GACCGTCCCG CTCCACGTGG TGCCCGTGCG CCGCGCGCAC CGGCCGGCGG CACCAATACG GCGCCCGCCG ATGGCAGCGA CAAACCGGCC GAAGCTACCC CTGGTAGCGA CGCCCCGAAA ACCACCGTTA AGCGCGTACG CAAAGCCGCG CCAGCTGCAG CAGCTGACGG TACCAAGACC GAGTAA
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Protein sequence | MGQKINPTGF RLAVSRNWAS RWYASNRDFA GMLAEDIKVR EYLKAKLKNA AVSRVLIERP AKNARITIFS ARPGVVIGKK GEDIENLKKE LSRQLGVPVA VNIEEVRKPE IDAKLIADSI TQQLEKRIMF RRAMKRAMQN AMRLGALGIK IMSSGRLNGI EIARCEWYRE GRVPLHTLRA DIDYGTSEAK TTYGVIGVKV WVYKGDTLGR GESPGAKLDA APSDEERKPR GPRRDARPGS DRPAPRGARA PRAPAGGTNT APADGSDKPA EATPGSDAPK TTVKRVRKAA PAAAADGTKT E
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