| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0257 |
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| Symbol | rplD |
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| ID | 4011703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 279811 |
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| End bp | 280431 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637939941 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_547120 |
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| Protein GI | 91786168 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000112537 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGTCG AACTCCTGAA TGACCAAGGT CTGGCTTCGT CCAAGGTGGA CGTGCCTGAT
ACCGTGTTTG GTCGCGAATA CAACGAAAGC CTGATTCACC AGGTGGTCGT GGCCTTCCAG
GCCAACGCCC GCCAGGGTAC CCGGGCCCAG AAGGACCGTG AGCAGGTCCG TCACTCGACC
AAGAAGCCTT TTAAACAAAA GGGAACTGGT CGTGCACGTG CTGGTATGAC GTCTTCGCCA
CTGTGGCGCG GCGGCGGTCG TATCTTCCCG AACATGCCTG ATGAAAACTT CACGCAGAAA
ATCAACAAGA AGATGTATCG CGCCGGCATG GCGTCGATCT TCTCGCAGCT GGCGCGCGAA
GGCCGCCTGG CTGTGGTTGA TTCCCTGGCT GTGGATTCAC CCAAGACGAA AGTCCTGGCT
GACAAGTTCA AGGCCATGAA CCTCAACTCG GTGCTGGTCA TCGCTGATGT GGTTGATGAA
AACCTGTACC TGGCTTCCCG CAACCTGGTG AACATCCTCG TGGTTGAGCC CCGTTACGCC
GATCCGGTGT CGCTGGTTCA CTACAAGAAG GTTCTGGTCA CCAAGGCTGC CATGGACCAA
CTCAAGGAGA TGTTCGCATG A
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| Protein sequence | MQVELLNDQG LASSKVDVPD TVFGREYNES LIHQVVVAFQ ANARQGTRAQ KDREQVRHST
KKPFKQKGTG RARAGMTSSP LWRGGGRIFP NMPDENFTQK INKKMYRAGM ASIFSQLARE
GRLAVVDSLA VDSPKTKVLA DKFKAMNLNS VLVIADVVDE NLYLASRNLV NILVVEPRYA
DPVSLVHYKK VLVTKAAMDQ LKEMFA
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