| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0256 |
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| Symbol | rplC |
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| ID | 4011702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 279128 |
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| End bp | 279811 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637939940 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_547119 |
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| Protein GI | 91786167 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000172376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCTGA GCAACTCCCT CGGGTTGCTG GGCCGCAAAG TTGGCATGAT GCGTCTGTTT
ACGGATGATG GGGACACAGT TCCTGTTACC GTGGTGGATG TATCGAACAA CCGCGTGACC
CAGGTTAAAA CCGAAGCAAA TGACGGCTAC GATGCCCTCC AAGTGGCATT TGGCGCGCGC
AAAGCATCGC GCGTGACCAA GCCGGCCGCC GGCCACCTTG CGAAAGCAGG CGTTGAAGCT
GGTGAGATCC TGAAAGAATT CCGCGTGACG GCTGACGTCG CAGGCAAATA TGCTGCGGGC
ACCGTTGTGC CTGCCGCTGA TGTGTTTGCG GTGGGTCAGC TGGTGGACGT GCAGGGCACC
TCCATTGGTA AAGGCTACGC CGGCACCATC AAGCGCCACA ACATGAGCTC GCAGCGCGCG
TCGCACGGTA ACAGCCGTTC GCACAACGTG CCCGGCTCCA TCGGTATGGC GCAGGATCCC
GGTCGCGTGT TTCCTGGTAA ACGCATGACG GGCCACCTGG GCGACGTCAC CGTGACCACG
CAAAACCTGA ACATCGTGCG CATTGACGAA GCCCGTCAGC TGCTGATGAT TCGCGGCGCT
GTGCCTGGTT CCAAAGGCGG TTTTGTCACG GTTCGTGCCG CGATCAAAGC CAAGCCCACC
ACCGCTGCTA AAGGAGCGAA CTGA
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| Protein sequence | MSLSNSLGLL GRKVGMMRLF TDDGDTVPVT VVDVSNNRVT QVKTEANDGY DALQVAFGAR
KASRVTKPAA GHLAKAGVEA GEILKEFRVT ADVAGKYAAG TVVPAADVFA VGQLVDVQGT
SIGKGYAGTI KRHNMSSQRA SHGNSRSHNV PGSIGMAQDP GRVFPGKRMT GHLGDVTVTT
QNLNIVRIDE ARQLLMIRGA VPGSKGGFVT VRAAIKAKPT TAAKGAN
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