Gene Bpro_0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_0238 
Symbol 
ID4011916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp261474 
End bp262106 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content63% 
IMG OID637939922 
Productmultiple antibiotic resistance (MarC)-related proteins 
Protein accessionYP_547101 
Protein GI91786149 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTTA AACCGCTCGT CACGCTGTTG GCCATCGTCA ACCCGCTGGC CATCGTGCCG 
TTTTTCATTC ACTACACCCA GGATTTCTCA AAGCCGCAGC GGCGGCGCAC CATCGCCACG
GCATCGTTCA GCGCCTTTGT CGTGATTGCC ATCAGCGCCC TCGCGGGACT GCAGATTCTC
GAGTTCTTCA GCATCTCGCT GGCGAGCTTC CAGGTGGGCG GCGGCATGCT GCTGTTGATC
AGCTCCATGA ACATGCTCAA TGCCCAGCCC GCCGAAGCCA AACCCAACAC CCACGAGATG
GAAGACGGGG CGGAAAAGGC GGCCAGGGGT GCCAGCATTG CGGTGGTGCC GCTGACCATC
CCGCTGCTCA CCGGCCCGGC CACCATGTCC ACCGTGGTGA TCTATGCGGA AAAGGCCAAG
ACGTTTTTCC AGCTCGGCAC CCTGGTGGGC TATGGCGTGG TGATCGGCCT GGCCACGGCG
TTGTGCTTTT CGCTGGCCGA ACCGATCGCC CGCGTGCTGG GGAAAACCGG CATCAATGTC
ATGACACGCC TGATGGGCCT GATATTGGCC GCGCTGGCCG TGGAAGTCAT GGCCGACGGC
CTGGGCAAGC TGTTCCCCGT GCTGCGCGGC TGA
 
Protein sequence
MDFKPLVTLL AIVNPLAIVP FFIHYTQDFS KPQRRRTIAT ASFSAFVVIA ISALAGLQIL 
EFFSISLASF QVGGGMLLLI SSMNMLNAQP AEAKPNTHEM EDGAEKAARG ASIAVVPLTI
PLLTGPATMS TVVIYAEKAK TFFQLGTLVG YGVVIGLATA LCFSLAEPIA RVLGKTGINV
MTRLMGLILA ALAVEVMADG LGKLFPVLRG