| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0135 |
|---|
| Symbol | |
|---|
| ID | 4012103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 141156 |
|---|
| End bp | 141974 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637939819 |
|---|
| Product | D-aminopeptidase DppA |
|---|
| Protein accession | YP_546998 |
|---|
| Protein GI | 91786046 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2362] D-aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.770845 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCC TGATTTCCAC CGACATCGAA GGCGTTGCCG GCGTTTTCCA CCACGAGCAG
GTGCGCAGCG GCAACCCCGA GTACGAGCGC GCCCGCCTGC TGATGACGCA CGAGGCCAAC
GCCGCCATTG CCGGCGCTTT CGAGGCCGGC GCCACCGAGG TGCTGGTCAA CGACTCGCAC
GGTGGCTTTC GCAACATGCC GCCAGACCTG CTGGATGCTC GCGCCCAGGC CGTCATGGGC
AAGCCGCGCT ACCTGAGCAT GATGGCCGGC GTCGACAACG GCATGGACGC TGTGTGCATG
ATCGGTTACC ACTCGCGTGC GCAGGGCCGC GGCATCCTGG CCCACACCAT CAACAGCTTT
GCTTTTGCAC GCGTGCGCTT CAACGGCGTC GAGCTGGGCG AAGCCGGCAT CTATGGCGCG
CTGGCCGGCG AGTACGGCGT GCCGGTGGTG ATGGCCAGCG GCGACGATGT GTTCATCGAG
GAACACCGGC CCGTGTTCCC GCATGCCACT TTTGTGCAAA CCAAGCGCGC CACCGGCCAG
ACCAGCGGCA TCAGCCTCTC GCCCGCGCAG GCCTGCAGCG CCATCCAGGT GGGCGTGGCG
GCCGCGCTGG CGCAGCTCGG CACGGCCCGC CCCTTTGTGC TGGCGGGGCC CATCGCCGTG
CACATCCAGA CCCAGACACC GGCGCTGGCC GATTTGTTTT GCCAGTGGCC CACCCTGCAG
CGGCTGGATG GCGATGAAGT CGGCTTTGAA GCACCGACGG TGGAGGCTGC GGTGCGCATG
GTCAACTGCC TGTCGGCCAT GTCAACCCTG CTGCGCTAG
|
|---|
| Protein sequence | MKVLISTDIE GVAGVFHHEQ VRSGNPEYER ARLLMTHEAN AAIAGAFEAG ATEVLVNDSH
GGFRNMPPDL LDARAQAVMG KPRYLSMMAG VDNGMDAVCM IGYHSRAQGR GILAHTINSF
AFARVRFNGV ELGEAGIYGA LAGEYGVPVV MASGDDVFIE EHRPVFPHAT FVQTKRATGQ
TSGISLSPAQ ACSAIQVGVA AALAQLGTAR PFVLAGPIAV HIQTQTPALA DLFCQWPTLQ
RLDGDEVGFE APTVEAAVRM VNCLSAMSTL LR
|
|---|
| |