Gene Bpro_0097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_0097 
Symbol 
ID4012297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp100735 
End bp101523 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content63% 
IMG OID637939782 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_546961 
Protein GI91786009 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only
[I] Lipid transport and metabolism 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCTG ATAATTCATC CATGTCGGTA GCCGTGATCA CAGGCGGTGC CCGCGGCATC 
GGCCTGGCGA TTGGCCAGTG GTTCCTGAAA CACGGTCATC GGGTCGCACT GCTCGACATC
GACGGCGATA CGCTGGCCCA GACGGCCGCC AGGCTGAATG ACGATCACGT GCTTGCCGTC
CACTGTGACG TGTCCGACCC GCAGCAGGTG CAAGCTGCCG TGGACAAGGT AAGGGCTGCC
TTCGGCCGGA TTGACGCGTT GGTTAATAAC GCCGGTGTGG CGGTGTTCAA ACCCATTGCT
GAAACTACCT TTGCGGAATG GCGCCACGTG ATGGCGACGA ATCTTGACGG TGCGTTTCTG
TGTACCCAGG CCTGCGCACC GGTCATGCAA AAAACTGGCG GTGGCAGCGT TGTCAATATC
GCGTCCATCT CCGGTCTGCG CGCCAGCACA CTGCGCGTTG CGTACGGCAC CAGCAAGGCC
GCGCTCATAC ACCTTACCAA GCAGCAGGCC GTGGAGCTGG GCAATGTCGG CATCCGGGTG
AACGCAATCG CTCCCGGCCC CGTAGAGACC GAGATGGCCA AGCTGGTTCA CAGCGTGGCC
ATCCGCTCGG ACTACTACGA TGCAATCCCG CTGAACCGCT ATGGCACAAC CGAGGAGATC
GCGTCGGTCG CCGGTTTCCT CTGCAGTGCT GCCGCGAGTT ATGTGAACGG CCAGGTCGTG
GCCGCGGACG GCGGCTTCGA CGCTGCCGGC GTAGGTCTGC CCACGTTGCG CAAGCGGGCC
GCAGCCTAG
 
Protein sequence
MTSDNSSMSV AVITGGARGI GLAIGQWFLK HGHRVALLDI DGDTLAQTAA RLNDDHVLAV 
HCDVSDPQQV QAAVDKVRAA FGRIDALVNN AGVAVFKPIA ETTFAEWRHV MATNLDGAFL
CTQACAPVMQ KTGGGSVVNI ASISGLRAST LRVAYGTSKA ALIHLTKQQA VELGNVGIRV
NAIAPGPVET EMAKLVHSVA IRSDYYDAIP LNRYGTTEEI ASVAGFLCSA AASYVNGQVV
AADGGFDAAG VGLPTLRKRA AA