Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0058 |
Symbol | |
ID | 4011060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 59868 |
End bp | 61487 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637939744 |
Product | extracellular solute-binding protein |
Protein accession | YP_546923 |
Protein GI | 91785971 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.112335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAAA GCAAGAAACT GCAAGCCTTG ATCGGCCCCC AGGAAAGCAT GCGCGTGATG AACGCGATGC AGGCAGGCGC CAAGCGGCGC GATGTGCTCG CCATGCTCAT GGCAGGCGGC ATGCAGGCCA CGCTGGCCGG CAGCCTGGCG GGCATTGCCG GCGCCGCCCA TGCGCAGACG CCGCGCCGTG GCGGACGGAT CCGGGTGGCC GGCGCCACCG CTGCAATCAA TGACACGCTG GATCCGGCCA AGCAGTCCAA CCAGAGCGAC TACATCCGCG GCAGCATGTT CTACAACGGC CTCACGGTGC TGGATGGCAG CCTCACGCCG CGCCCCGCGC TGGCCGAAGA GTTCACCACC AGGGATGCGA CCACCTGGGT CTTCAAGCTG CGCAAGGGCG TGGTCTTTCA TGACGGCAAG CCGCTGGTCC CAGCCGACGT GGTGTTCTCG CTGATGCGCC ACAAGGACCC GGCCACTGCC TCCAAGGCCA AGGCTCTGGC CGACCAGATC GACGACGTGA AGGCCAGCGG CCCTAACGAA GTGACGATCA AGCTCAAGGC GCCCAACGCC GACTTGCCGG TGATCCTGGG CACCTTCCAC TTCCATATCG TCAAGGACGG CACCACCGAC TTCAATGCCG GCATCGGCAC CGGCCCTTAC AAGGTCAAGG AATTCAAGCC TGGCGTGCGC TCGATCGCGG TGCGCAACGA GGCCTATTGG AAGCCGGGCC GCCCTTACCT CGATGAGATT GAATATGTGG GCATCGGCGA TGAAGGCGCG CGTGTCAATG CGCTGCTGTC GGGCGACCTG GACCTGGTGG GCTCGGTCAA TCCACGTTCG GTGCAGCGTG TGCGCGACTC CGCCGGCCAT GCGATCTTTG AGACGCAGTC GGGCGGGTAC ACCGACCTGG TGATGCGCCG CGACGGTGGT CCGGGCTCCA ACCCCGACTT CGTGATGGCC ATGAAATACA TGTTTGACCG CGAGCAGATG AAGCGTTCCA TTGCGCTGGG CCATGCGGTC GTTGCCAACG ACCAGCCTAT CGATCCGACC AACCGCTTTT ATTTTGCCGG CCTGCCGCAG CGCGCCTTCG ATCTGGACAA GGCCAAGTTC CACTTGCAAA AAGCCAATCT GGGCAGCGCC CCGATTCCGG TTGTGGCCTC GCCCGCAGCG CTGTATTCTG TCGAGATGGC ATTGGTGATG CAGCAGACGG CGCAGAAACT GGGCTTGAAC CTGGACGTCA AACGCATGCC CGCCGATGGC TACTGGTCGA ATCACTGGAT GAAAAGCCCG GTCGGTTTCG GCAACGTCAA TCCGCGCCCC AGCGCCGACA CGCTGTTCAC GCAGTTCTTC AAGTCGGATG CGGCCTGGAA CGAGTCGGGC TGGAAAAGCG AGAAGTTCGA CCAGCTGCTG GTTGCCGCGC GCGCCGAAAC CGACGACACC AAGCGCCGCA AGATGTACGC CGACATGCAG GTGCTGGTGC ACGAGCAGGG CGGCATCGGC ATTCCGCTGT TCCTGGCCAG CATTGACGGC CACTCGAAGA AACTCAAGGG CTTGTCGCCG ATCCCGGTCG GCGGCCTGAT GGGCTACGCC TTCGCTGAAC ACGTCTGGCT GGAAGCATGA
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Protein sequence | MNESKKLQAL IGPQESMRVM NAMQAGAKRR DVLAMLMAGG MQATLAGSLA GIAGAAHAQT PRRGGRIRVA GATAAINDTL DPAKQSNQSD YIRGSMFYNG LTVLDGSLTP RPALAEEFTT RDATTWVFKL RKGVVFHDGK PLVPADVVFS LMRHKDPATA SKAKALADQI DDVKASGPNE VTIKLKAPNA DLPVILGTFH FHIVKDGTTD FNAGIGTGPY KVKEFKPGVR SIAVRNEAYW KPGRPYLDEI EYVGIGDEGA RVNALLSGDL DLVGSVNPRS VQRVRDSAGH AIFETQSGGY TDLVMRRDGG PGSNPDFVMA MKYMFDREQM KRSIALGHAV VANDQPIDPT NRFYFAGLPQ RAFDLDKAKF HLQKANLGSA PIPVVASPAA LYSVEMALVM QQTAQKLGLN LDVKRMPADG YWSNHWMKSP VGFGNVNPRP SADTLFTQFF KSDAAWNESG WKSEKFDQLL VAARAETDDT KRRKMYADMQ VLVHEQGGIG IPLFLASIDG HSKKLKGLSP IPVGGLMGYA FAEHVWLEA
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