Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0030 |
Symbol | rdgC |
ID | 4012403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 30702 |
End bp | 31676 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637939716 |
Product | recombination associated protein |
Protein accession | YP_546895 |
Protein GI | 91785943 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2974] DNA recombination-dependent growth factor C |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.847391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCAAAA ACGTGATGGT GTACCGCATC GGGCCCGCGT GGTCGGTTTC TCTGGAGCAG CTCGAAGCAA ACCTGCAGGC CATGCGCTTT GTCGAGTGCG GCCTGACGCA GGAAAAATCC GTCGGCTGGG TCGAGCCGCG CGGTGAGGCA AACGGCCCGC TGGTCGAGTC GGTGGGCGGC CAGTGGCTGC TCAAGCTGAT GCTGGAAAGC AAGGCCGTGC CGGCCTCGGT CATCAACCGC AAGGCCAAGG AGCGGGTGGC GCAGATTGAA GCTGCCACCG GCCGCAAGCC CGGCAAAAAG GAAACCCGGG ATCTCAAGGA AGAGCTCAAG CTGGACCTGC TGCCGATGGC CTTTACCCGG CAGGGCTCGG TGCAGGTGTG GATAGACCCC GAGGCGCGCC TGCTGATGAT TGACGCGGCC AGCCAGGCCA AGGCCGACGA GGTGCTGACC TGCCTGGCCA AATCGATGGA GGGCCTGGGT GCCATGCTGC TGCAGACCAC GGCTTCGCCG GTGGCCGCCA TGTCCGAGTG GCTGGTCAGC CAGGAGCCAC CGGCCGGTTT CAGTGTGGAC CGCGAATGCG AGCTCAAGGC TGGCGACGAG TCAAAAGCGG TGGTGCGCTA TTCGCGGCAC GCGCTCGACA TCGACGAAGT GCAGCAGCAC ATCAACCACG GCAAGCTGCC CACGCGGCTG GCCATGACCT GGGAAGGGCG GGTGTCGTTC ATGCTGACGG ATACGCTGCA GATCAAGAAA TTGGCGTTTG TTGACGGCGT GTTTGAAGAC GATGCCGCTG CCAGCAAGGC CGACCGGTTT GATGCCGACG CGGCGATTGC CACCGGGGAA ATCCGTCGGC TGATTCCCGA TTTGCTGGAG GCGCTGGGCG GCGAACTGGT GATGGGGGCT GACGCGCCTG CGGCATTGGC CCCAGCATTG GCCCCAGCGC TGGCTGCGGC CGAGGCAGAG TCGCCGCCCT TTTAA
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Protein sequence | MFKNVMVYRI GPAWSVSLEQ LEANLQAMRF VECGLTQEKS VGWVEPRGEA NGPLVESVGG QWLLKLMLES KAVPASVINR KAKERVAQIE AATGRKPGKK ETRDLKEELK LDLLPMAFTR QGSVQVWIDP EARLLMIDAA SQAKADEVLT CLAKSMEGLG AMLLQTTASP VAAMSEWLVS QEPPAGFSVD RECELKAGDE SKAVVRYSRH ALDIDEVQQH INHGKLPTRL AMTWEGRVSF MLTDTLQIKK LAFVDGVFED DAAASKADRF DADAAIATGE IRRLIPDLLE ALGGELVMGA DAPAALAPAL APALAAAEAE SPPF
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