| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mfla_2256 |
|---|
| Symbol | |
|---|
| ID | 3999812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacillus flagellatus KT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007947 |
|---|
| Strand | + |
|---|
| Start bp | 2407285 |
|---|
| End bp | 2408010 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637939182 |
|---|
| Product | pyrimidine 5-nucleotidase |
|---|
| Protein accession | YP_546364 |
|---|
| Protein GI | 91776608 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0948171 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.0000228381 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCACACA AGGTCTGGAT CTTCGACCTC GACAATACCT TGCATGATGC AGATGCGGAA
ATCTTTCCGC ATCTGCATAT CGAGATGACG CGCTACATCA TGAGCGAGCT CAGGCTGGAG
GAAGAGGCGG CATGCCTGTT GCGCCAGCAT TACTGGCGCA TCTACGGCGC CACCCTGAAA
GGCCTGATGC GCCATCACCG TGTGCACCCG CACCATTTCC TGCAGACCAC CCACCAGCTC
GCCGGGCTGC CTCAAATGGT GCGCTCGGTC AAAAAGCTGC GACATACCTT GCAGCAACTC
TCTGGCCGTA AGGTAGTATT CACTAACGCG CCGATGAGTT ATGCCAAAAG AGTGTTAAAA
TTGCTCGCTA TCGACGACTT GTTCGACCAG GTGTTCAGTG TGGAATCCTC TGGTTTCCAC
CCCAAACCTG CCATACGGGG ATTTCAGCAC CTGCTGCGAA CGCTCAAGGT CAATGCCGGC
GACTGCGTGC TACTCGAAGA CAGCCTGCCG GCATTGATGA CAGCCAAGCG ACTGGGCATG
AACACCATCC ATGTCTCGCG CAGGCCAAAA CGCCCCAGTT ATGTGGATGC ACGCATTTCG
AGCGTGTTGG AGCTACCGCA TACCTGGCTT TATAAAACGT ACAACAATGC AGAGTATCGC
CATCCCCCGG CGTACTGTCC CGGACTGGCT TCCTGCCTGG ATCAAGAGGT AAAGAAATGG
CTTTGA
|
|---|
| Protein sequence | MSHKVWIFDL DNTLHDADAE IFPHLHIEMT RYIMSELRLE EEAACLLRQH YWRIYGATLK
GLMRHHRVHP HHFLQTTHQL AGLPQMVRSV KKLRHTLQQL SGRKVVFTNA PMSYAKRVLK
LLAIDDLFDQ VFSVESSGFH PKPAIRGFQH LLRTLKVNAG DCVLLEDSLP ALMTAKRLGM
NTIHVSRRPK RPSYVDARIS SVLELPHTWL YKTYNNAEYR HPPAYCPGLA SCLDQEVKKW
L
|
|---|
| |