Gene Mfla_1918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_1918 
Symbol 
ID4001193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp2057245 
End bp2058873 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content60% 
IMG OID637938834 
Productfumarase 
Protein accessionYP_546026 
Protein GI91776270 
COG category[C] Energy production and conversion 
COG ID[COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain 
TIGRFAM ID[TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATTG GCATGTCGAT TGCCAGGATG TTCTCTAGAT GCACCCCCAT CCCAAATCTC 
TCGGTCAGGT ATAATCTCGA CTTATACCAT CTCGAATTCC CCATCATGGC CTTCATCCGC
CAAGAAGATT TTATCGACAG CATCCACCAG GCATTGCAAT ACATTGCCTG CTACCATTCG
CCGGACTTCC TCGCTGCCAT GCACGATGCA TGGCAGCGTG AGCCGTCTCC GGCAGCGCGG
GATGCGATCG GTCAAATCCT CATCAACTCT TATCTCTGCG CACAAGGACA ACGCCCGCTC
TGCCAAGACA CCGGGATTGT CGTGGCCTTC GTTTCCGTCG GCATGAACGT GCAGTGGCAG
GCCAGCATGA GCCTGCAGGA GATGGTGGAC GAAGGTGTAC GCCGCGCCTA CCTCGACCCG
GACAACCGCC TGCGCGCCTC CATCGTGCGC GACCCCGCGG GCAAGCGCCT CAATACCCGC
GACAACACGC CGTCTGTCGT ACATGTGGAC ATGGTGCCCG GCGATACGGT GGAAATCCAT
ATCGCCGCCA AAGGTGGTGG ATCGGAAAAC AAATCCAAAC TCGCCATGCT GGAACCTTCC
GACGACCTCA TCGAATGGGT GCTGAAAACA GTACCGGAAA TGGGTGCCGG CTGGTGCCCA
CCTGGGGTAC TCGGCATCGG CATCGGCGGC ACGGCGGAAA AAGCCGTACT GCTCGCCAAG
CAATCCTTGT TTGCTCCCAT CGACATCCAG GCATTGAGAG CCAGGGGACC TCAGACACGG
GCAGAGGAGC TACGCCTGGA AATCTACGAG AAAGTCAACC GGCTCGGCAT CGGCGCTCAA
GGCCTGGGCG GACTCACAAC GGTACTGGAT GTGAAGATCC TGGAGGCCCC GACCCATGCG
ACTTCGCTAC CAGTCGCCAT CATTCCCAAT TGCGCAGCCA CACGCCATGT GCATTTCACA
TTGGATGGCA CTGGGCCAGC ACGCCTGCCT GCGCCCCGGC TGGAAGATTG GCCACGAGTT
GCGCTGGATG CCAGCACCCC CATGCGCCGG GTCGATCTCG GCAAGGTAAC ACGAGAAGAC
GTGATCAGCT GGCAGCCAGG AGAAAAACTG CTGCTCTCGG GCAAACTGCT CACCGGGCGC
GATGCCGCCC ATAAGCGCAT CGTCGACCTG ATCGCCCGCG GTGAGCCGAT GCCGGAGGGC
CTGGACTTCA CCAACCGCTT CATCTATTAC GTCGGGCCGG TCGACCCGGT AGGCGATGAA
ATCATTGGCC CAGCGGGCCC CACCACCGCC ACACGTATGG ACCGCTTCAC GGAGACCATG
CTGACCCAAA CCGGCCTGCT CGGCATGATA GGCAAGGCCG AGCGCGGCGA AGCCACCGTA
CAGTCCATCA AGCGGCATCA ATCGGTCTAC CTGATCGCGA TCGGCGGCGC AGCCTACCTG
ATCTCGCAGG CCATCAAGGC ATCTCGTATC GTGGCATTTG CCGACCTGGG CATGGAAGCC
ATCTACGAAT TCACGGTGGA GGATATGCCC GTGACGGTGG CCGTGGATAG CCGAGGCCAC
GCTGTGCATG ATACCGGCCC GGCCGAGTGG CGTCCCAGAA TTGCTAACAT CCCCATTTTC
AGCGAATAG
 
Protein sequence
MIIGMSIARM FSRCTPIPNL SVRYNLDLYH LEFPIMAFIR QEDFIDSIHQ ALQYIACYHS 
PDFLAAMHDA WQREPSPAAR DAIGQILINS YLCAQGQRPL CQDTGIVVAF VSVGMNVQWQ
ASMSLQEMVD EGVRRAYLDP DNRLRASIVR DPAGKRLNTR DNTPSVVHVD MVPGDTVEIH
IAAKGGGSEN KSKLAMLEPS DDLIEWVLKT VPEMGAGWCP PGVLGIGIGG TAEKAVLLAK
QSLFAPIDIQ ALRARGPQTR AEELRLEIYE KVNRLGIGAQ GLGGLTTVLD VKILEAPTHA
TSLPVAIIPN CAATRHVHFT LDGTGPARLP APRLEDWPRV ALDASTPMRR VDLGKVTRED
VISWQPGEKL LLSGKLLTGR DAAHKRIVDL IARGEPMPEG LDFTNRFIYY VGPVDPVGDE
IIGPAGPTTA TRMDRFTETM LTQTGLLGMI GKAERGEATV QSIKRHQSVY LIAIGGAAYL
ISQAIKASRI VAFADLGMEA IYEFTVEDMP VTVAVDSRGH AVHDTGPAEW RPRIANIPIF
SE