Gene Mfla_1705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_1705 
Symbol 
ID4001242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp1825626 
End bp1827032 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content58% 
IMG OID637938619 
Productisopropylmalate isomerase large subunit 
Protein accessionYP_545814 
Protein GI91776058 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0065] 3-isopropylmalate dehydratase large subunit 
TIGRFAM ID[TIGR00170] 3-isopropylmalate dehydratase, large subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0785429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00273209 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAGCCA AAACACTTTA CGACAAATTG TTTGATTCCC ACGTGGTGCG CGAGGAAAAC 
GGCGCCGCTT TGATTTATAT CGACCGTCAT CTGGTGCATG AGGTGACCAG CCCTCAGGCC
TTCGAAGGCC TGAAAATGGC GGGACGCAAG CTATGGCGCG TCAATTCCGT GCTGGCAGTG
CCGGATCATA ATGTGCCCAC CACCGACCGC AGTCATGGCA TTGCCGATCC AATCTCGCGC
TTGCAGGTGG AAACCTTGGA TCAGAACTGT CGCGATTTTG GCGTGACTGA ATTCAGGATG
GGCGATGTGC GCCAAGGTAT TGTTCATGTG ATGGGCCCTG AACAGGGTGC GACCTTGCCG
GGCATGACGG TAGTCTGTGG CGACTCCCAT ACCAGCACTC ACGGTGCGTT TGGTGCGCTG
GCGCACGGCA TCGGCACCTC AGAAGTCGAA CACGTGATGG CGACGCAATG CCTGGTCCAG
AAGAAATCCA AGGCCATGCA GATACGTGTA GAAGGGCAGC TGGGTCCCGG CGTTACTGCC
AAGGATGTCG CTTTGGCGAT TATTGGCAAG ATCGGCACGG CGGGTGGCAC CGGCTATGCC
ATTGAGTTTG CAGGCTCGGC GATTCGCAGC TTGAGCATGG AAGGACGCAT GACATTGTGC
AATATGGCGA TCGAGGCGGG TGCCCGTGCC GGCATGGTGG CCGTCGATGA CGTCACGATC
AATTATGTCA AGGGCCGGCC ATATGCTCCC AAGCCTGAGC AATGGGACGC AGCGGTTGCT
TACTGGCGCA CCTTGCACAG TGACGAAGGC GCGAAGTTTG ACGCCGTGGT GGAGATCAAG
GCCGAAGATA TCGAGCCGCA GGTCACTTGG GGCACTTCTC CTGAAATGGT GACCGCTATC
AATAGCATCG TGCCCGACCC CAGCAAGGAA AGTGATCCTA CCAAGCGCAG TGGCATGGAG
CGTGCCTTGC AGTACATGGG CTTGCAACCC AATACGCCGA TCTCCGACAT CCCGATCGAC
AAGGTATTCA TCGGTTCCTG TACGAATTCC CGCATTGAGG ATTTGCGTGC CGCCGCTGCC
GTCGCCAAGG GAAAACATGT CGCGCCCAAT GTCAAGTTGG CGATGGTGGT GCCTGGCTCC
GGTCTGGTGA AGGCGCAGGC GGAACAGGAA GGTCTGGACA AGATTTTCAA GGAAGCTGGC
TTCGAGTGGC GTGAGCCCGG CTGCTCCATG TGTCTGGCGA TGAATGCCGA CCGTCTGGAG
CCGGGCGAGC GTTGTGCCTC CACTTCAAAC CGCAACTTCG AAGGGCGGCA GGGCGCGGGT
GGCCGCACGC ATCTCGTCAG CCCAGGGATG GCGGCGGCGG CAGCAGTGGC AGGGCATTTT
ATCGATGTGC GTCAATTGCT GAATTGA
 
Protein sequence
MSAKTLYDKL FDSHVVREEN GAALIYIDRH LVHEVTSPQA FEGLKMAGRK LWRVNSVLAV 
PDHNVPTTDR SHGIADPISR LQVETLDQNC RDFGVTEFRM GDVRQGIVHV MGPEQGATLP
GMTVVCGDSH TSTHGAFGAL AHGIGTSEVE HVMATQCLVQ KKSKAMQIRV EGQLGPGVTA
KDVALAIIGK IGTAGGTGYA IEFAGSAIRS LSMEGRMTLC NMAIEAGARA GMVAVDDVTI
NYVKGRPYAP KPEQWDAAVA YWRTLHSDEG AKFDAVVEIK AEDIEPQVTW GTSPEMVTAI
NSIVPDPSKE SDPTKRSGME RALQYMGLQP NTPISDIPID KVFIGSCTNS RIEDLRAAAA
VAKGKHVAPN VKLAMVVPGS GLVKAQAEQE GLDKIFKEAG FEWREPGCSM CLAMNADRLE
PGERCASTSN RNFEGRQGAG GRTHLVSPGM AAAAAVAGHF IDVRQLLN