| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mfla_1622 |
|---|
| Symbol | |
|---|
| ID | 4000116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacillus flagellatus KT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007947 |
|---|
| Strand | - |
|---|
| Start bp | 1736166 |
|---|
| End bp | 1736909 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637938534 |
|---|
| Product | tetratricopeptide TPR_2 |
|---|
| Protein accession | YP_545731 |
|---|
| Protein GI | 91775975 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3063] Tfp pilus assembly protein PilF |
|---|
| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00247403 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAGGAAGT TCCTGGTGGG GGCTTGCTGC TTGTTGCTGA TCGCTTGTGC CGCCACTGAA
ACCAAGCAGG ATACCGAGGC AAGCCGTGAG CGCGCCCGTG TACATACCGA ACTGGGTGCT
GGATATTATG CCCAGAACCA GATTGCCGTG GCGTTGGAGG AATTTGAGCT TGCCGCGCAG
ATCAATCCTT CCTATGCGCC TGCCTATAAC GGCCTTGGGC TAGTGTATGG CACATTGCGT
GAAGACGAGA AGGCAGATGC AGCATTCCGC AAAGCGTTGC AGCTAGACCC GAAAAGCTCT
GAAACGCGCA ACAATTACGG TAGCTTTCTC TGCGCGCGCA ACCGTATCGA TGAATCTATC
GTCCAGTTCA TGGAAGCGGT CAAGAATCCG CTGTATGTCA CGCCGGGCGT GGCATACATG
AATGCTGGCA CTTGCCTGCT ACGTAAGAAG GATATTAAGC AGGCTGAGCT TTACCTGCAG
CATGCCTTGC AATTGCAGCC ACAATTATTT CAGGCAGGGT ATCAATTGGC GGTGATTGCC
CATAGTCGAG GCGAGTATGA GGCGGCGCGC GACTACCTTA AGCCTGCGTT GGAAAGTGAC
AGCCCAACCG CCGACATGCT TTGGCTGGGC ATTAAGCTTG CTCGCGAAGC AGGCGACCGT
GATAGTGAGG CCAGTTATGC TTTGCAGCTG AGGAGGAAAT TTCCTCATTC CGAGCAAGCA
AAACGATTAT TGTCAGGACA GTAA
|
|---|
| Protein sequence | MRKFLVGACC LLLIACAATE TKQDTEASRE RARVHTELGA GYYAQNQIAV ALEEFELAAQ
INPSYAPAYN GLGLVYGTLR EDEKADAAFR KALQLDPKSS ETRNNYGSFL CARNRIDESI
VQFMEAVKNP LYVTPGVAYM NAGTCLLRKK DIKQAELYLQ HALQLQPQLF QAGYQLAVIA
HSRGEYEAAR DYLKPALESD SPTADMLWLG IKLAREAGDR DSEASYALQL RRKFPHSEQA
KRLLSGQ
|
|---|
| |