| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mfla_1612 |
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| Symbol | |
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| ID | 4000354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacillus flagellatus KT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007947 |
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| Strand | - |
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| Start bp | 1725594 |
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| End bp | 1726664 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637938524 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_545721 |
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| Protein GI | 91775965 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000933226 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCACA CTGCAACGCC TATTACCCTC ACAATTACCC AGGAGCTCGG GGGCATGCGT
CTCGACCAGG CACTGCAGCG CCTGATGCCC GAACACTCGC GTTCACGCAT CCAGGGCTGG
ATCAAGGATG GACTGGTCAC CATTGACGAT GAGACACCGA CCGCCAAGTT CAAGGTCTGG
GGCGGGGAGC AAGTGCAGAT TAAGCCGCAA GCAACACCGG AAGCATTGGC TTTCGAGCCT
GAAAATATTC CGCTGGAGGT GGTGTTCGAG GATGAGCATA TCCTGGTGAT TAACAAGCCT
GCCGGGATGG TAGTGCATCC TGCGGCGGGC AACTGGAGTG GCACCTTGCT CAATGCCTTG
CTCTACCACG CGCCCCAGCT CAAGGATGTG CCTAGGGCGG GCATTGTGCA CCGGCTGGAC
AAGGATACCA GCGGCCTGTT GGTCGTTGCC AAGACGTTGG CTGCACAAAC CAATCTAGTC
AGGCAGTTGC AGGCGCGTAC CGTCAAGCGA GAGTACCGTA CCATCGTCTG GGGCCAGGTG
TGGCGCAATG GCAAGGTAGA CCAACCGATT GGCAGACATC CGCATGCACG CACCAAGATG
GCAGTGAACC GCATGGGCAA GCCCGCAGTC ACCCATTATG AGGTACTGGA TCGCTTTTCT
GTACATACCT ATATGCGTTG TCTGCTCGAA ACCGGGCGCA CGCACCAGAT TCGCGTGCAT
ATGCAACATC TCAAGGCGCC GATCGTCGGC GATCCTGTGT ACGGCATTCG CGGCATTCTG
CCGCTACGCC ATATCTCGGA CAACCTCAGG AATGTATTGC TCGAATTCAA GCGCCAGGCA
CTGCATGCTA TCCGGCTCGG ACTCAAACAT CCCGTGAGCG GTGAGCCAAT GGAATGGCAA
GTGGAACTGG CTGCCGACAT GAAAATATTG CTGGAAGCGA TCCGCGCTGA AAATGTGCCG
CCAGAAGAGG CTGATGCTTT TTACGTGGAT GATGGCGAAT TCGCTTATGA GTATGAATAC
GGCGAAGACG AAAACGACGA TTGGCTTGAG GAGGATGACG ATGTTGAGTG A
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| Protein sequence | MSHTATPITL TITQELGGMR LDQALQRLMP EHSRSRIQGW IKDGLVTIDD ETPTAKFKVW
GGEQVQIKPQ ATPEALAFEP ENIPLEVVFE DEHILVINKP AGMVVHPAAG NWSGTLLNAL
LYHAPQLKDV PRAGIVHRLD KDTSGLLVVA KTLAAQTNLV RQLQARTVKR EYRTIVWGQV
WRNGKVDQPI GRHPHARTKM AVNRMGKPAV THYEVLDRFS VHTYMRCLLE TGRTHQIRVH
MQHLKAPIVG DPVYGIRGIL PLRHISDNLR NVLLEFKRQA LHAIRLGLKH PVSGEPMEWQ
VELAADMKIL LEAIRAENVP PEEADAFYVD DGEFAYEYEY GEDENDDWLE EDDDVE
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