Gene Mfla_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_1298 
Symbol 
ID4001220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp1377680 
End bp1379902 
Gene Length2223 bp 
Protein Length740 aa 
Translation table11 
GC content58% 
IMG OID637938202 
Product(p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA 
Protein accessionYP_545407 
Protein GI91775651 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000189131 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0061753 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTGTTTG TTCCTGATCT CCTTTCTCAG GCCAGCGCGC AAGGAGCGCT GGATGTTGGG 
GCCTGGCTTG CATCCCTGGA AGGGCAATTC TCTACGGAAG AGGTTGCGCT CATTCGCCAC
AGCGTGGATT TTGCCGCGCC GTGCTATGCC GGCAGCCTCG AAATCACGAC GGTGCCTGTC
TTGCACCATG TGTTGGGAGT GGCCTCCATC CTGGTCGGGA TGAGCATGGA TGCGGAAACG
ATTGCCGCCA CGGTGCTTCA TGCCTGCCCG GAATATCTGC CTGGATGGAA AGAAAAGCTG
CAACAGGCGT TCTCGCCGCA GATAGTGGCC TTGGTTGAGG GCTTCGCGCG TATGGAGCAG
ATCCAGAGCT TCAGCCGTCC GGACATCGGC CGCACCAAGG ATCGCAAGAA GGACAGCGAG
GCCCAGCAGG CACAGGTCGA GAGCATGCGT AAAATGCTGC TTGCCATGGT GGAGGATATC
CGCGTGGTGC TGATCAAGCT GGCAGACAGG GTGGAAACCC TGCGCAGTCT GGCGGGAGCG
CCCGAGGATG AGCAGCTGCG CATCGCTGAG GAGGCGAAGA CGATTTATGC GCCCCTGGCG
AATCGTCTTG GTGTCTGGCA TATCAAGTGG GAGCTGGAAG ACCTCTCGCT GCGCTTTCTC
GAGCCCAAAC TCTATAAGGA AATCGCCAAG CTGCTGGCCG AGAAGCGTGT CGGCCGTGAG
CAATATATCA AGGAAGTATT GGAGATATTG CAGCAGCAAT TGCAGTCTGC AGGCATTCAG
GCTGACATGA TGGGCCGCCC CAAGCATATT TACAGCATTG TCAACAAGAT GCGCCGCAAG
CAGCTTTCCT TCAACGAGTT ATACGACGTG CGCGCAGTGC GCATTCTCGT GGACGATGTC
AAGGATTGCT ATGCAGTGCT CGGGCTGATC CACAATCTTT GGCAGCCTAT CCCCAAGGAG
TTCGATGACT ACATCGCACG TCCCAAGAGC AACAATTATC GTTCCCTGCA TACGGTCGTG
ATCGGTCCGC GTAACCTGCC GCTGGAAATC CAGATCCGCA CTCATGAAAT GCACTATCAC
TCCGAGCTGG GCGTGGCTGC ACACTGGCGA TACAAAGAGG GCGGCAGGGC CGACAGCAAG
TTCGATGACA AAATCGTCTG GTTGCGGCAA ATCCTCGAGT GGAGGCAGGA GGTATCCGAT
GACGGCGGGA ATGCAGGCCA TTTCAGGAAT GAAATGTTCC AGGACAAGGT CTACGTGCTG
ACTCCGCAAG GAAAAGTCGT GGACCTGCCG CGGGGTGCGA CGCCGGTGGA CTTCGCCTAC
ATCGTGCATA CTGATCTTGG GCATCGAACC CGCGGCGCCA AGGTGGACGG CAGCATTGTG
CCGCTCAACT ACAAATTGCA AAATGGCCAG CGCGTTGAAA TTCTCGCGGC AAAACAAGGG
GGGCCAAGCA GGGACTGGCT GAACCCCAAC CTTGGCTACC TGCAAAGCTC GCGCGCTCGC
GCCAAGGTAC GGCATTGGTT CCGCTACCAA AACTTCGAAG AGGATGTTGC CCAGGGTCGT
CTACGGCTGG ACAAGGAGTT GCACCGCTTG GGCGCGGTTG ACGTCAACCT GGAAAAAATT
GCCCAGAAAC TGCATTACCC CAAACTGGAA GAGTTGCTGG CCGCGATCGG CCGCGGAGAA
ATCGGCGAGC ACCAGATCAC CCAGGCCGTG CAAAGCGAAT TGCCGGCCAA GCCTGAGCAG
GACGTGCCGT TCCTGCTCAA GTCGGGAGGC GATACTGACT CTTCAGGCGT CTTGGTAGAA
GGGGTCGGCA ACCTGATGAC TTATATGGCG AAGTGCTGCA AACCTGCACC GCCGGATGCG
ATCATCGGCT ACGTGACGCG GGGGCGGGGC GTGACCATCC ATCGCCAGGC CTGCCCCTTC
ATCAAGCGCT TGCCCGAGGA AAAACATGAC CGGCTGCTGG CAACCCAATG GGGCAATCGC
CAGGAAAAGC TTGCCGGCGT GGACATCGAC ATCGAGGCCT ATGACCGCCA GGGCTTGCTG
CGCGACATCA GCGACCTATT TGCGCGCGAG CGCGTGAATG TCACGCAGGT CAGGACGCAG
AGTCGCAATA ACCAGGCCAG GATGAGTTTT TCCATTGAGA TTGCAGACCT GGAGCAGTTG
GCGAGGTTAC TGGCTTTGTT ACGCCAGGTA CCTAGCGTCA ATTCGGCACA GCGGCACCTA
TAG
 
Protein sequence
MVFVPDLLSQ ASAQGALDVG AWLASLEGQF STEEVALIRH SVDFAAPCYA GSLEITTVPV 
LHHVLGVASI LVGMSMDAET IAATVLHACP EYLPGWKEKL QQAFSPQIVA LVEGFARMEQ
IQSFSRPDIG RTKDRKKDSE AQQAQVESMR KMLLAMVEDI RVVLIKLADR VETLRSLAGA
PEDEQLRIAE EAKTIYAPLA NRLGVWHIKW ELEDLSLRFL EPKLYKEIAK LLAEKRVGRE
QYIKEVLEIL QQQLQSAGIQ ADMMGRPKHI YSIVNKMRRK QLSFNELYDV RAVRILVDDV
KDCYAVLGLI HNLWQPIPKE FDDYIARPKS NNYRSLHTVV IGPRNLPLEI QIRTHEMHYH
SELGVAAHWR YKEGGRADSK FDDKIVWLRQ ILEWRQEVSD DGGNAGHFRN EMFQDKVYVL
TPQGKVVDLP RGATPVDFAY IVHTDLGHRT RGAKVDGSIV PLNYKLQNGQ RVEILAAKQG
GPSRDWLNPN LGYLQSSRAR AKVRHWFRYQ NFEEDVAQGR LRLDKELHRL GAVDVNLEKI
AQKLHYPKLE ELLAAIGRGE IGEHQITQAV QSELPAKPEQ DVPFLLKSGG DTDSSGVLVE
GVGNLMTYMA KCCKPAPPDA IIGYVTRGRG VTIHRQACPF IKRLPEEKHD RLLATQWGNR
QEKLAGVDID IEAYDRQGLL RDISDLFARE RVNVTQVRTQ SRNNQARMSF SIEIADLEQL
ARLLALLRQV PSVNSAQRHL