| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mfla_1051 |
|---|
| Symbol | |
|---|
| ID | 4001312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacillus flagellatus KT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007947 |
|---|
| Strand | + |
|---|
| Start bp | 1097068 |
|---|
| End bp | 1098969 |
|---|
| Gene Length | 1902 bp |
|---|
| Protein Length | 633 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637937951 |
|---|
| Product | diguanylate cyclase/phosphodiesterase |
|---|
| Protein accession | YP_545160 |
|---|
| Protein GI | 91775404 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGTC CCGTGCATCA CCAGCCCGTA TCGCCCAAAT TGCGTAAGGC CCATATCCTG
GCTGTGGGCC TCGCCTTGTT GATTGCCACG GTGACGCTGA TCAGCATGGA GTATGCTTCG
CTCAGGCGCA ACATGACCGT CACCATGCAG ATCCAGATGC GGATTATGGC AGGCAATATT
GCTCAGGCGC TGGTGCGGGG CGAACATGAG GTGGCATCTG AAGTCCTGGC AAGCTTGGCC
GAAGCGCCTG AAATCGATAC GGCGGTTCTA TATGACATGC AACAGAACCG TTTTGCCGAA
TATGTACGTC CCGGTAGCCT GTCGCGCTTG TTTGACATGA TGGTCGCGGA CCAGGTACAG
CGTCATTCAG ACATGCACAA AAGTGAAATA TGGCAGCCTG TCGTATATGG CGGCATGCAA
GTCGGGATGT TGTACATGCG ATCCAATATG AAAGGATTGT ATCGCCAGCT GCTTTGGTAT
GTTGGTACCA CGGTAATGGT GATGTTGGTG ACTTTGTTTG CCGCTGCCCT GCTGCTCAGC
CGATTGCAAC GCGCGATGCT CAAGGCCGAA GAGCGGGCGG GTTTTCTGGC CAATTATGAT
ACGGTGACCG ATCTTCCCAA CCGCCATGCT TTCAGCAGAC ATTTCCATTT GCTGCTGGAA
GGGGCGCGTC ATCGGCGTGG CGTATTGGCA TTGCTGGTAT TTGACCTGGA TGATTTCAAG
GTGATCAACG ATACCCTGGG GCACGATGTC GGGGATAAGC TGCTGCATTT GGTCGCGCAG
CGCCTGATGG TCGCAGCAGG CAAGAAAAAT ACAGTGTATC GCGTGGGTGG GGATGAATTT
GCCATGATGC TTGACCAGCC CGCGGATGTC GAGAATGTGG AGGCTGTTGC CAATCGGTTC
ATTCGAGCGC TGGCGCCGCC TATTGTCTTG AATGACCGCA ACTTTTATAT CGGTGTCAGC
ATTGGCGCGA GTATCTATCC TTACGACGGG GAGGATGCCG CCCATTTGCT GCGTGATGCC
GATGCAGCCA TGTACTATGC CAAGAGCCGC GGCAAAAACA ATTTCCAGAT GTTCTCTGCA
GAAATGCATC ACAAGAGCTC GACTCGCTTG CTCCTCGAAA CCGAATTGCG CGTCGCGCTG
GAAGAAAAAC AGTTCGAGCT TTACTATCAG CCGCAGTTCA GTCTGCCGGA TTGCAAGCTG
GTGGGGGTGG AGGCTTTGAT CCGCTGGCAT CATCCACAGC GTGGTCTATT GTGCCCAAGT
AGCTTTATTC CGGTTGCCGA GGAGACTGGC CTCATCGTGC GCATCGGGGA GTGGGTATTG
CGCGAGGCTT GCAGGCAGGC CATGGAGTGG AAGGCGTTGG GAGTGCCACT GCGCATGAGC
GTCAACCTCT CGGGGCGCCA GTTCCGCCAA GAGAACCTGG TACAGACCAT GACCAAGATC
ATTGAGCGAA CTGGCATGGA TAGCAGCCTG CTCGAATTGG AAATTACCGA AACCGTCCTG
ATGGAAGACG CGGAAGCGAC CACTACTCGC CTGGCAGACC TCAAGGCCAT GGGCATGCAT
CTTGCCATCG ATGATTTCGG CACAGGTTAT TCATCCATGG CATATCTCAA GCGTTTTCCC
GTCAGCCGGC TTAAGATAGA CCGCAGCTTT ATCCGGGATA TCCCCAATGA TCCCGACGAT
GTCGCGATTA CCACGGCCAC TATCCAGATG GCGCACAGCC TGAAGCTTGA GGTCGTGGCA
GAAGGCGTGG AGACCAAAGC ACAGTTGCAA TTCCTGCGGG AGCAGGGAAG CGATATGGTG
CAAGGCTATT TATTCAGTCG TCCAGTGAGC GCACGGGAGA TGGCAGAGCT TGTCATCACT
GGCAAGGGGC ATCAGGAAAA TGATTTTATC CTGGAGCAAT AA
|
|---|
| Protein sequence | MMSPVHHQPV SPKLRKAHIL AVGLALLIAT VTLISMEYAS LRRNMTVTMQ IQMRIMAGNI
AQALVRGEHE VASEVLASLA EAPEIDTAVL YDMQQNRFAE YVRPGSLSRL FDMMVADQVQ
RHSDMHKSEI WQPVVYGGMQ VGMLYMRSNM KGLYRQLLWY VGTTVMVMLV TLFAAALLLS
RLQRAMLKAE ERAGFLANYD TVTDLPNRHA FSRHFHLLLE GARHRRGVLA LLVFDLDDFK
VINDTLGHDV GDKLLHLVAQ RLMVAAGKKN TVYRVGGDEF AMMLDQPADV ENVEAVANRF
IRALAPPIVL NDRNFYIGVS IGASIYPYDG EDAAHLLRDA DAAMYYAKSR GKNNFQMFSA
EMHHKSSTRL LLETELRVAL EEKQFELYYQ PQFSLPDCKL VGVEALIRWH HPQRGLLCPS
SFIPVAEETG LIVRIGEWVL REACRQAMEW KALGVPLRMS VNLSGRQFRQ ENLVQTMTKI
IERTGMDSSL LELEITETVL MEDAEATTTR LADLKAMGMH LAIDDFGTGY SSMAYLKRFP
VSRLKIDRSF IRDIPNDPDD VAITTATIQM AHSLKLEVVA EGVETKAQLQ FLREQGSDMV
QGYLFSRPVS AREMAELVIT GKGHQENDFI LEQ
|
|---|
| |