Gene Mfla_0605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_0605 
Symbol 
ID3999245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp630452 
End bp631102 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content48% 
IMG OID637937505 
ProductCRISPR-associated exonuclease Cas4 family protein 
Protein accessionYP_544716 
Protein GI91774960 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.452129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGTTG CTGAGGCTAA GGAAATGGAG GTGCTGACTA TCTCTGCATT ACAGCACGTG 
GCTTATTGTC CTCGCCAGTT TGCATTGATT CATGTTGAGC AAGTTTGGGA AGAAAACTTT
TTCACTGCAC ATGGACAGGT TCTGCATCAG CGCGTGGATG CAGGGGCGGC AGAACAACGT
GGAAATGTAC GTTCTGAGCG TGCTGTGTCA GTCTACTCTA CAAAGTTAGG ATTAAGTGGC
AAGCTGGATT TGCTTGAGGT GGATGTATCT GGGGAAAATA CGCGTTACTT TCCAGTGGAA
TATAAACGCG GAAAACCCAA GGTCGAAGAT TGGGATCGTA TCCAGTTATG TGCTCAGGCG
ATGTGTCTTG AGGAGATGAG AGGGATCCGT ATCACGGAAG GAGCAATGTG GTATTGGCAG
GAGAGGAAGA GGCAATCCGT GCAAATTGAC CAGACATTAC GGGATGCCAC TGTCAGCGCC
ATCAAGCTGG CGCGTGAAAT TCTGCTTTCC GGCAGAACAC CATCTCCGGT CAAGGAAAAA
TCAAGGTGTA AGGCTTGTTC TTTGAATGAG TTGTGTGTGC CTGATGCGAT TCGGAAGGAT
AATTCAGCAA ATTATGTTGA GCAGATGTTT CATCAAGGTG TGCATGCATG A
 
Protein sequence
MMVAEAKEME VLTISALQHV AYCPRQFALI HVEQVWEENF FTAHGQVLHQ RVDAGAAEQR 
GNVRSERAVS VYSTKLGLSG KLDLLEVDVS GENTRYFPVE YKRGKPKVED WDRIQLCAQA
MCLEEMRGIR ITEGAMWYWQ ERKRQSVQID QTLRDATVSA IKLAREILLS GRTPSPVKEK
SRCKACSLNE LCVPDAIRKD NSANYVEQMF HQGVHA