Gene Mfla_0604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_0604 
Symbol 
ID3999244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp629533 
End bp630414 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content47% 
IMG OID637937504 
ProductCRISPR-associated Csh2 family protein 
Protein accessionYP_544715 
Protein GI91774959 
COG category[L] Replication, recombination and repair 
COG ID[COG3649] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01595] CRISPR-associated protein, CT1132 family
[TIGR02589] CRISPR-associated protein, Csd2 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.520474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.472142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATTA CTAACCGATA TGAGTTTGTA TATTTTTTTG ATGTAACCAA TGGTAACCCC 
AATGGGGACC CTGATGCTGG CAATATGCCG CGGCTTGATC CTGATTCTAG TAAAGGCTTG
GTCACTGATG TTTGCTTGAA ACGAAAAATC CGGAATTTTG TGGAGCTGAC AGAGGAAGGC
CATCCTGGTT TTGAGATATA TGTCAAAGAA AAAGGCATTC TGAATTTACA GAATAAAAAA
GCGTATGAAG CATTGTCCAT TACGCCTGAA CCCAAGAAGC TGCCTAAAGA TGAGGCAAAA
GCAAGGGAGG TGACGGCATG GATGTGTGCG AATTTCTTTG ATGTGCGTAC TTTTGGCGCT
GTGATGACTA CCGAAGTCAA CAGTGGGCAG GTGCGTGGCC CTGTTCAACT TGCATTTGCG
AAATCAATCG ACCCGATTAT TCCATTGGAG CTTTCAATTA CCAGAATGGC TGTTACCACT
GAGAAAGAGG CAGAGGCTCA ATCGGGTGGT AACCGGACAA TGGGACGCAA GCATATTGTG
CCTTATGGTT TGTATCGGGT GCATGGCTTT GTTTCCGCTA AGCTTTCGGA GAAGACAGGA
TTTTCTGACG ATGATCTTGC CAAGCTATGG CAGGCGTTGA CCTTGATGTT TGAACATGAC
CGATCTGCTG CACGTGGGGA AATGGCTGCG CGTAAGCTCG TGGTGTTCAA GCACGCTGAT
GCGCTGGGCA GTGCACCTGC GCACTTATTG TTTGACCGGG TAAAGGTAGA GCGGGTGAGT
GGAGAGCGAG ATACACCTGC TACTACTTTT TCAGATTACC GGATTGTTCT CGATACCAAT
GGTTTAGATG CCTTAGGCGT GACTGTCGAG GAAAAGTTTT AG
 
Protein sequence
MAITNRYEFV YFFDVTNGNP NGDPDAGNMP RLDPDSSKGL VTDVCLKRKI RNFVELTEEG 
HPGFEIYVKE KGILNLQNKK AYEALSITPE PKKLPKDEAK AREVTAWMCA NFFDVRTFGA
VMTTEVNSGQ VRGPVQLAFA KSIDPIIPLE LSITRMAVTT EKEAEAQSGG NRTMGRKHIV
PYGLYRVHGF VSAKLSEKTG FSDDDLAKLW QALTLMFEHD RSAARGEMAA RKLVVFKHAD
ALGSAPAHLL FDRVKVERVS GERDTPATTF SDYRIVLDTN GLDALGVTVE EKF