Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mfla_0227 |
Symbol | |
ID | 3999356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacillus flagellatus KT |
Kingdom | Bacteria |
Replicon accession | NC_007947 |
Strand | - |
Start bp | 237382 |
End bp | 239919 |
Gene Length | 2538 bp |
Protein Length | 845 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637937118 |
Product | DNA topoisomerase I |
Protein accession | YP_544339 |
Protein GI | 91774583 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0428468 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAAC TGCTGATCGT CGAATCGCCA TCCAAGGCCA AGACCCTGAA AAAATACCTG GGCAAGGATT TTGAGGTTTT GGCCTCATAT GGGCACGTCC GTGACCTGGT TCCCAAGACC GGGGCCGTCG ATCCGGATCA TGACTTTGCC ATGAAATATG AAGTGATCGA CCGCAACGCA CGCCATGTGG ATGCCATTGC CAAGGCGGTC AAGACTGCCG ATGCCATCTA CCTCGCCACC GACCCGGACC GCGAAGGGGA AGCCATTTCC TGGCACATTG CCGAGATCCT CAAAAGCAAG AAACTGCTCA AAGACAAGCT GATCAAGCGC GTCGTGTTCC ACGAAATCAC CAAAAATGCC GTACAGAACG CGATCGAAGA ACCACGTGAC ATTTCCATGC CGCTGGTCAA TGCCCAGCAG GCACGTCGGG CACTGGATTA CCTGGTTGGC TTCAACCTGT CGCCTTTGTT GTGGAAGAAG ATTCGCCGTG GCTTGTCCGC CGGCCGCGTG CAAAGCCCGG CATTGCGCCT GATCGTCGAG CGCGAGCTTG AGATCGAGGC ATTCAAGAGC CAGGAATACT GGACCATCCA TCTGGAATCC GCCAAGCACC AGCATGTGTT CGATGCCAAG CTGGTGCAAC TTGAAGGCAA GAAGGTAGAG CAGTTCACCA TTACCAACCA AGCACAGCAA CAGGAAGTCG TCGGCAAGCT GCTTGCCGTG AGTGCAGGCA AGACCACCGT CTCCCGCGTC GAGAAAAAAC AGCGCAGCCG CAGCCCGGCC GCCCCATTCA CGACATCCAC CCTGCAGCAG GAAGCCGTGC GCAAGCTCGG CTTCACCACC AGCCGCACCA TGCGGGTCGC CCAGCAATTG TACGAAGGTA TCGACATCGG TAGTGGCACG ATGGGCTTGA TCACCTATAT GCGTACCGAC AGCTTCAGCC TAGCGACCGA GGCAGTCATG CAGATCCGCG ACTATATCAA GCAGAATTTT GCCGCCGAAT ATCTGCCCAA GTCCCCGATC ATGTACAAGA CCAAGGCCAA GAACGCACAG GAGGCGCATG AAGCGATACG TCCGACCGAC ATCTCACGCA CTCCGGCCAG CATGCGTGCG TTCCTCACTG ACGAGCAGTT CAGGTTGTAT GAGATGATCT GGAAGCGTGC ACTGGCTTGC CAGATGACCC AGGCCAAATT CGATGCCGTC AGCATTGATC TCGCCGTTGG ATCCGATGCC AACCTGTTCC GTGCCACAGG CCAGACACTG ATATTTCCGG GTTTTATTGC GGTTTACATG GAGGGGGTGG ACGACGAGGA AGAGGAAGGC GAAAGCAAGC TGCCGCACCT CGAAACCGGC GAAGTGCTCG CCGTGCAGAA AATATACGGG GATCAGCATT TCACAGAACC ACCCCCGCGC TATTCCGAGG CCAGCCTGGT CAAGGCACTT GAGGAATATG GCATTGGACG CCCCTCGACT TATGCCAGCA TCATTTCCAC GCTGCAAGAT CGCGAATATG TAGTGCTGGA CAAGAAACGC TTCATCCCTA CTGATGTTGG CCGCGTGGTA AACAAATTCC TTACCGAGCA TTTTACCCGC TATGTGGACT ACGGTTTTAC CGCCAACCTG GAAAATGAGC TGGATGACAT CGCGGAGGGT GAGCGCGAAT GGATTCCCGT TCTCAATGAA TTCTGGCAAG GCTTCAACAA CCAAATTCAT GAAAAAAGCA ACGTGGAGCG CCCCGGCGTT GAAATGCTCG ATGAGGCATG CCCCAAATGC GGCAAACCGT TGCAGTCCCG CTTGGGCCGC TTCGGAAAAT TCATCGGCTG CTCGGGCTAT CCCGAGTGCG ACTATATCCG TAACCCGAAC GCGAATGCCA ACAACAATGA GCCTACGGTC ATTGGGCAGG AACCCGAGAG CGGCAAGGAC ATCCTGCTGC TGAATGGTCC TTATGGTCCC TACCTGCAGA TCGGCCTGCC CGAGGCAGAC AGCAAGAAGA AACCCAAGCG CGTCAGCATC CCCAAGGAAA TCCCTGTTTC CAGCCTGGAT ATGGAAACGG CGCTCAAGCT CATTGCATTG CCGCGTGACT TGGGCCAGCA TCCCGAAACG GGCAAGAAAG TGGTCGCCAA TATCGGACGC TTTGGGCCTT ACGTCAACCA CGATGGCAAG TTCAAGTCTA TTCCCAAGAG CGAGAGTGTT TTCGATATTG ACCTGGCACG TGCTATCGAA CTGCTGGCGC AGGCCAATGC CGGCGCAGCG CCCATCAAGG AGCTGGGCAA CCACCCGGAC GGCACGGGTA ATATTGCCAT CTATGCTGGA CGCTTCGGCC CTTATGTGCA ACACGGCAAG TTGCGCGCCA CCTTGCCCAA GGGCCAGGAA CCGGAAACCC TGACCATGGA GCAGGCCCTG GAGCTGCTAT CAGCCAAGGC GGCAAAAGAT GCTCCGGCCA AGAAGGCCAA GACTACTACT GCGAAAAAGA CAAGCAGCAC CAAGAAGGCG GCTACAACGA CTCGCAGGAA AAAAGCATCG GCGGGCGAGA GCGAATAG
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Protein sequence | MSKLLIVESP SKAKTLKKYL GKDFEVLASY GHVRDLVPKT GAVDPDHDFA MKYEVIDRNA RHVDAIAKAV KTADAIYLAT DPDREGEAIS WHIAEILKSK KLLKDKLIKR VVFHEITKNA VQNAIEEPRD ISMPLVNAQQ ARRALDYLVG FNLSPLLWKK IRRGLSAGRV QSPALRLIVE RELEIEAFKS QEYWTIHLES AKHQHVFDAK LVQLEGKKVE QFTITNQAQQ QEVVGKLLAV SAGKTTVSRV EKKQRSRSPA APFTTSTLQQ EAVRKLGFTT SRTMRVAQQL YEGIDIGSGT MGLITYMRTD SFSLATEAVM QIRDYIKQNF AAEYLPKSPI MYKTKAKNAQ EAHEAIRPTD ISRTPASMRA FLTDEQFRLY EMIWKRALAC QMTQAKFDAV SIDLAVGSDA NLFRATGQTL IFPGFIAVYM EGVDDEEEEG ESKLPHLETG EVLAVQKIYG DQHFTEPPPR YSEASLVKAL EEYGIGRPST YASIISTLQD REYVVLDKKR FIPTDVGRVV NKFLTEHFTR YVDYGFTANL ENELDDIAEG EREWIPVLNE FWQGFNNQIH EKSNVERPGV EMLDEACPKC GKPLQSRLGR FGKFIGCSGY PECDYIRNPN ANANNNEPTV IGQEPESGKD ILLLNGPYGP YLQIGLPEAD SKKKPKRVSI PKEIPVSSLD METALKLIAL PRDLGQHPET GKKVVANIGR FGPYVNHDGK FKSIPKSESV FDIDLARAIE LLAQANAGAA PIKELGNHPD GTGNIAIYAG RFGPYVQHGK LRATLPKGQE PETLTMEQAL ELLSAKAAKD APAKKAKTTT AKKTSSTKKA ATTTRRKKAS AGESE
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