Gene Mfla_0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_0227 
Symbol 
ID3999356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp237382 
End bp239919 
Gene Length2538 bp 
Protein Length845 aa 
Translation table11 
GC content56% 
IMG OID637937118 
ProductDNA topoisomerase I 
Protein accessionYP_544339 
Protein GI91774583 
COG category[L] Replication, recombination and repair 
COG ID[COG0550] Topoisomerase IA 
TIGRFAM ID[TIGR01051] DNA topoisomerase I, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0428468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAC TGCTGATCGT CGAATCGCCA TCCAAGGCCA AGACCCTGAA AAAATACCTG 
GGCAAGGATT TTGAGGTTTT GGCCTCATAT GGGCACGTCC GTGACCTGGT TCCCAAGACC
GGGGCCGTCG ATCCGGATCA TGACTTTGCC ATGAAATATG AAGTGATCGA CCGCAACGCA
CGCCATGTGG ATGCCATTGC CAAGGCGGTC AAGACTGCCG ATGCCATCTA CCTCGCCACC
GACCCGGACC GCGAAGGGGA AGCCATTTCC TGGCACATTG CCGAGATCCT CAAAAGCAAG
AAACTGCTCA AAGACAAGCT GATCAAGCGC GTCGTGTTCC ACGAAATCAC CAAAAATGCC
GTACAGAACG CGATCGAAGA ACCACGTGAC ATTTCCATGC CGCTGGTCAA TGCCCAGCAG
GCACGTCGGG CACTGGATTA CCTGGTTGGC TTCAACCTGT CGCCTTTGTT GTGGAAGAAG
ATTCGCCGTG GCTTGTCCGC CGGCCGCGTG CAAAGCCCGG CATTGCGCCT GATCGTCGAG
CGCGAGCTTG AGATCGAGGC ATTCAAGAGC CAGGAATACT GGACCATCCA TCTGGAATCC
GCCAAGCACC AGCATGTGTT CGATGCCAAG CTGGTGCAAC TTGAAGGCAA GAAGGTAGAG
CAGTTCACCA TTACCAACCA AGCACAGCAA CAGGAAGTCG TCGGCAAGCT GCTTGCCGTG
AGTGCAGGCA AGACCACCGT CTCCCGCGTC GAGAAAAAAC AGCGCAGCCG CAGCCCGGCC
GCCCCATTCA CGACATCCAC CCTGCAGCAG GAAGCCGTGC GCAAGCTCGG CTTCACCACC
AGCCGCACCA TGCGGGTCGC CCAGCAATTG TACGAAGGTA TCGACATCGG TAGTGGCACG
ATGGGCTTGA TCACCTATAT GCGTACCGAC AGCTTCAGCC TAGCGACCGA GGCAGTCATG
CAGATCCGCG ACTATATCAA GCAGAATTTT GCCGCCGAAT ATCTGCCCAA GTCCCCGATC
ATGTACAAGA CCAAGGCCAA GAACGCACAG GAGGCGCATG AAGCGATACG TCCGACCGAC
ATCTCACGCA CTCCGGCCAG CATGCGTGCG TTCCTCACTG ACGAGCAGTT CAGGTTGTAT
GAGATGATCT GGAAGCGTGC ACTGGCTTGC CAGATGACCC AGGCCAAATT CGATGCCGTC
AGCATTGATC TCGCCGTTGG ATCCGATGCC AACCTGTTCC GTGCCACAGG CCAGACACTG
ATATTTCCGG GTTTTATTGC GGTTTACATG GAGGGGGTGG ACGACGAGGA AGAGGAAGGC
GAAAGCAAGC TGCCGCACCT CGAAACCGGC GAAGTGCTCG CCGTGCAGAA AATATACGGG
GATCAGCATT TCACAGAACC ACCCCCGCGC TATTCCGAGG CCAGCCTGGT CAAGGCACTT
GAGGAATATG GCATTGGACG CCCCTCGACT TATGCCAGCA TCATTTCCAC GCTGCAAGAT
CGCGAATATG TAGTGCTGGA CAAGAAACGC TTCATCCCTA CTGATGTTGG CCGCGTGGTA
AACAAATTCC TTACCGAGCA TTTTACCCGC TATGTGGACT ACGGTTTTAC CGCCAACCTG
GAAAATGAGC TGGATGACAT CGCGGAGGGT GAGCGCGAAT GGATTCCCGT TCTCAATGAA
TTCTGGCAAG GCTTCAACAA CCAAATTCAT GAAAAAAGCA ACGTGGAGCG CCCCGGCGTT
GAAATGCTCG ATGAGGCATG CCCCAAATGC GGCAAACCGT TGCAGTCCCG CTTGGGCCGC
TTCGGAAAAT TCATCGGCTG CTCGGGCTAT CCCGAGTGCG ACTATATCCG TAACCCGAAC
GCGAATGCCA ACAACAATGA GCCTACGGTC ATTGGGCAGG AACCCGAGAG CGGCAAGGAC
ATCCTGCTGC TGAATGGTCC TTATGGTCCC TACCTGCAGA TCGGCCTGCC CGAGGCAGAC
AGCAAGAAGA AACCCAAGCG CGTCAGCATC CCCAAGGAAA TCCCTGTTTC CAGCCTGGAT
ATGGAAACGG CGCTCAAGCT CATTGCATTG CCGCGTGACT TGGGCCAGCA TCCCGAAACG
GGCAAGAAAG TGGTCGCCAA TATCGGACGC TTTGGGCCTT ACGTCAACCA CGATGGCAAG
TTCAAGTCTA TTCCCAAGAG CGAGAGTGTT TTCGATATTG ACCTGGCACG TGCTATCGAA
CTGCTGGCGC AGGCCAATGC CGGCGCAGCG CCCATCAAGG AGCTGGGCAA CCACCCGGAC
GGCACGGGTA ATATTGCCAT CTATGCTGGA CGCTTCGGCC CTTATGTGCA ACACGGCAAG
TTGCGCGCCA CCTTGCCCAA GGGCCAGGAA CCGGAAACCC TGACCATGGA GCAGGCCCTG
GAGCTGCTAT CAGCCAAGGC GGCAAAAGAT GCTCCGGCCA AGAAGGCCAA GACTACTACT
GCGAAAAAGA CAAGCAGCAC CAAGAAGGCG GCTACAACGA CTCGCAGGAA AAAAGCATCG
GCGGGCGAGA GCGAATAG
 
Protein sequence
MSKLLIVESP SKAKTLKKYL GKDFEVLASY GHVRDLVPKT GAVDPDHDFA MKYEVIDRNA 
RHVDAIAKAV KTADAIYLAT DPDREGEAIS WHIAEILKSK KLLKDKLIKR VVFHEITKNA
VQNAIEEPRD ISMPLVNAQQ ARRALDYLVG FNLSPLLWKK IRRGLSAGRV QSPALRLIVE
RELEIEAFKS QEYWTIHLES AKHQHVFDAK LVQLEGKKVE QFTITNQAQQ QEVVGKLLAV
SAGKTTVSRV EKKQRSRSPA APFTTSTLQQ EAVRKLGFTT SRTMRVAQQL YEGIDIGSGT
MGLITYMRTD SFSLATEAVM QIRDYIKQNF AAEYLPKSPI MYKTKAKNAQ EAHEAIRPTD
ISRTPASMRA FLTDEQFRLY EMIWKRALAC QMTQAKFDAV SIDLAVGSDA NLFRATGQTL
IFPGFIAVYM EGVDDEEEEG ESKLPHLETG EVLAVQKIYG DQHFTEPPPR YSEASLVKAL
EEYGIGRPST YASIISTLQD REYVVLDKKR FIPTDVGRVV NKFLTEHFTR YVDYGFTANL
ENELDDIAEG EREWIPVLNE FWQGFNNQIH EKSNVERPGV EMLDEACPKC GKPLQSRLGR
FGKFIGCSGY PECDYIRNPN ANANNNEPTV IGQEPESGKD ILLLNGPYGP YLQIGLPEAD
SKKKPKRVSI PKEIPVSSLD METALKLIAL PRDLGQHPET GKKVVANIGR FGPYVNHDGK
FKSIPKSESV FDIDLARAIE LLAQANAGAA PIKELGNHPD GTGNIAIYAG RFGPYVQHGK
LRATLPKGQE PETLTMEQAL ELLSAKAAKD APAKKAKTTT AKKTSSTKKA ATTTRRKKAS
AGESE