Gene Mfla_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_0196 
Symbol 
ID3999110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp207996 
End bp208868 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content59% 
IMG OID637937087 
Productdiaminopimelate epimerase 
Protein accessionYP_544308 
Protein GI91774552 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0253] Diaminopimelate epimerase 
TIGRFAM ID[TIGR00652] diaminopimelate epimerase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.465069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000651224 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGCGGCA GTTGCCGCCA TTTCAAGGCA GTTTTTATGA AACTCAGTTT TACCAAGATG 
CAGGGCATAG GCAATGACTT CATTGTGGTG GATGGGTATA GCCGTCCAGT CAGCCTGGAT
GCAGATACCA TCCGCCGTCT GGCCGATCGG CATTTCGGCA TTGGCTTTGA CCAGTTGCTG
TTGGTAGAAC GCCCTACAGT GGAGGGCGTC GATTTTCGCT ACCGGATATT CAACGCCGAC
GGCGGCGAAG TGGAGCAATG TGGCAATGGG GCGCGCTGTT TCGTGCGTTA CGTGCACGAC
AAGTCCCTGA CCAGCAAGCG TGAAATCCGG GTACAAACGG CGCGTGGCAT CATCCTGCCC
AGGTTGGAAG ACAATGGGTT AGTCACGGTG AATATGGGCG AGCCACGCTT TGAGCCGGCA
GAGGTGCCGT TCATTGCCGA CCGGGAGGCG ATGACTTACC TGCTGCAAGT CGCCGACCAG
GCGCTGGAAA TTTCCGTGGC TTCCATGGGG AATCCCCATG CCGTGACCGT CGTTGAGGAT
GTCGATACGG CGCCGGTGGA AAGGCTGGGG CCTCTGGTTG AGCGCCACGA GCGCTTTCCC
CAGCGGGTCA ACGCAGGGTT CATGCAGATC GTAGATGAGC ACCATATCCG TTTGCGCGTA
TTCGAGCGCG GTAGCGGCGA GACCCTGGCA TGCGGGACCG GTGCCTGTGC CGCCGTGGCC
AGTGGGATCA GGCGCGGCTT GCTGCAGTCC CCAGTCAGGG TTGCCACCCG GGGCGGCGAA
TTGATCATCG CCTGGGAAGG TGGCGGGCAG CCGGTCTGGA TGACCGGCCC TGCCGAAACT
GTATTCGAGG GTAGTATCGA TATTGAGGTT TAG
 
Protein sequence
MCGSCRHFKA VFMKLSFTKM QGIGNDFIVV DGYSRPVSLD ADTIRRLADR HFGIGFDQLL 
LVERPTVEGV DFRYRIFNAD GGEVEQCGNG ARCFVRYVHD KSLTSKREIR VQTARGIILP
RLEDNGLVTV NMGEPRFEPA EVPFIADREA MTYLLQVADQ ALEISVASMG NPHAVTVVED
VDTAPVERLG PLVERHERFP QRVNAGFMQI VDEHHIRLRV FERGSGETLA CGTGACAAVA
SGIRRGLLQS PVRVATRGGE LIIAWEGGGQ PVWMTGPAET VFEGSIDIEV