| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mfla_0188 |
|---|
| Symbol | |
|---|
| ID | 3999488 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacillus flagellatus KT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007947 |
|---|
| Strand | + |
|---|
| Start bp | 199865 |
|---|
| End bp | 200917 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637937079 |
|---|
| Product | peptidoglycan-binding LysM |
|---|
| Protein accession | YP_544300 |
|---|
| Protein GI | 91774544 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000749903 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTATAAAT ACATTATAAC GCTGCTCATG CTTTGTTGCC CGATTTTGCC TGTCCTGGCG
GATGAGGTAA AGCTGCAACC TCATCATCCT GATCGGTATG TCGTGGTAAA AGGGGATACG
TTATGGGGAA TCGCTGGGCG CTTTCTCAAA GATCCCTGGC AGTGGCCGCA GGTATGGAAA
ATGAACCGCG AGCAGATCAA GAACCCTCAT TTGATCTATC CTGGCGATGT CGTGATGCTC
GATATGAGTA GCGGTTCTCC GCAATTGCGC CTGCTGCGCG AAACGGTGGC CAATCCCGAG
GTAACCTTAA CTCCTGGCAT TCGTACTGAA CAGCTGGATG TCGAAGCAAT CCCGACGATT
TCTCCCCGTA TCATCGCTCC TTTCCTGAGC CAGCCGCTGA TCATCGAAAA TGACGGCCTC
AAAGACGCGC CAAGGATTAT CGCAGGACCG GAAAACCGCG TGGTACTGAG TCCGGGCTCC
CGCATCTATG TCGACAAGAT TGACGAAGGG GAGGGAACCT TGTGGAATAT CTACCGTACG
GGCAAGACGT ATATCGACCC CGAGACCAAG GCAGTACTCG GTACGGAGGC GATTTACCTG
GGAGATGCAA GGATTAGCAA GTATGGTGAG CCTGCCAGTG GCGATATCGT CAGCGCCAAG
GAAGAGATAT TCGCCAACGA TAAACTGGTG GCAGCGCCCG AGAGCCTGCA AACCAATTTT
GTGCCGCAGG CGCCGGAGGA CGATGTCCAG GGGCGCATCC TCTCCATCTA TGGCGGGGTG
GCTGAAGCCG GGCGGAATAC CATCATTGCC ATCAGCAAGG GAAGTGACGA CGGGCTGGAG
CAAGGACATG TGCTTGCTAT CAACCGTAAT GGCCGGGTCA TTAAGAACCC TGGTTACGAC
AAGAAGAACA AGAAAGGCTC AGAGAACATC AAGCTCCCCA ACGAGCGTAT CGGGCTCGCC
ATGGTGTTCC GCACTTTCGA CAAGATATCC TACGCGCTGA TCATGCAGGC CACCGAACCA
GTCAATGTGC TGGATGTGGT GGAGAAGCCA TAG
|
|---|
| Protein sequence | MYKYIITLLM LCCPILPVLA DEVKLQPHHP DRYVVVKGDT LWGIAGRFLK DPWQWPQVWK
MNREQIKNPH LIYPGDVVML DMSSGSPQLR LLRETVANPE VTLTPGIRTE QLDVEAIPTI
SPRIIAPFLS QPLIIENDGL KDAPRIIAGP ENRVVLSPGS RIYVDKIDEG EGTLWNIYRT
GKTYIDPETK AVLGTEAIYL GDARISKYGE PASGDIVSAK EEIFANDKLV AAPESLQTNF
VPQAPEDDVQ GRILSIYGGV AEAGRNTIIA ISKGSDDGLE QGHVLAINRN GRVIKNPGYD
KKNKKGSENI KLPNERIGLA MVFRTFDKIS YALIMQATEP VNVLDVVEKP
|
|---|
| |