| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4925 |
|---|
| Symbol | |
|---|
| ID | 3973842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 5495361 |
|---|
| End bp | 5496395 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637928038 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_534766 |
|---|
| Protein GI | 90426396 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0392] Predicted integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.785076 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAAG CAATACGCAG GGCGGTCTCG TTTCTGCGCC AGAAGCAAAT CCTGCATAAA
CTCGGTTTTG TGATCAGCGT CCTGGTCATC GCGATTGCGT GCTACGTGCT CTTTCACATG
CTGCGCGGCA TCGACGTCGA CGACGTCATC GATGCGGTGA AACAGACCGA GCCCAGTTCG
GTGGCGCTGT CGGCGCTGTT CGTCGCCGCC GGCTATTTCA CCCTAACGTT CTATGATCTG
TTCGCGGTGC GCGCCATCGG CCGCTCCGAT GTGCCCTATC GCACCAACGC GCTGGCCGCG
TTCGCCAGCT ATTCGATCGG TCACAATGTC GGCGCCAGCG TCTTCACCGG CGGCGCGGTG
CGCTATCGGA TCTATTCCGC TTGGGGGCTG GATGGCGTCG ACATCGCCAA GATCTGCTTT
CTCGCCGGGC TGACGTTTTG GCTCGGCAAC GCCGCGGTGC TCGGGCTCGG CATCGCCTAT
CATCCGGAGG CGGCCTCGGC GATCGATCAG CTGCCGCCCT GGGTGAACCG CGCCGGCGCG
ATCGTCATCA TCATCGGGCT TTTGAGCTAT GTGGCCTGGG TCTCGATCCG GCCGCGCTGC
GTCGGTCGCG GGCATTGGAA GGTCACTCTG CCGGGCGGCG CGCTGACGCT GGTGCAGATC
GCGATCGGCA TCATCGACCT CGGCTTCTGC GCGCTGGCGA TGTACGTGCT GCTGCCGGAC
GAACCCAATG TCGGCTTCGT CGTGGTGGCG GTGATCTTCG TCTCGGCGAC GCTGCTCGGC
TTCGCCAGCC ATTCGCCGGG CGGGCTCGGC GTGTTCGACG CCGCCATGCT GGTCGGGCTG
TGGCAGATGG ACAAGGAAGA GCTGTTGGCC GGCATGCTGC TGTTCCGCAT GCTGTATTAT
GTCGCCCCGT TCATCATCTC GGTGATCCTG CTGGCGATCC GCGAATTGGT GCTCGGCGCC
CGCTCCAAAC GGTTGCGCAA GATCGCCGCG GCGCTGGACG CCAAGCCGGT CCGTGAAGAC
CCGACCCCAG GATAG
|
|---|
| Protein sequence | MLEAIRRAVS FLRQKQILHK LGFVISVLVI AIACYVLFHM LRGIDVDDVI DAVKQTEPSS
VALSALFVAA GYFTLTFYDL FAVRAIGRSD VPYRTNALAA FASYSIGHNV GASVFTGGAV
RYRIYSAWGL DGVDIAKICF LAGLTFWLGN AAVLGLGIAY HPEAASAIDQ LPPWVNRAGA
IVIIIGLLSY VAWVSIRPRC VGRGHWKVTL PGGALTLVQI AIGIIDLGFC ALAMYVLLPD
EPNVGFVVVA VIFVSATLLG FASHSPGGLG VFDAAMLVGL WQMDKEELLA GMLLFRMLYY
VAPFIISVIL LAIRELVLGA RSKRLRKIAA ALDAKPVRED PTPG
|
|---|
| |