| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4904 |
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| Symbol | |
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| ID | 3973727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 5473315 |
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| End bp | 5474520 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637928017 |
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| Product | O-succinylhomoserine sulfhydrylase |
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| Protein accession | YP_534745 |
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| Protein GI | 90426375 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.247924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAGA CCAAGACCAC CGCACCATCC ACCTCCGCCT ATCGCCGCGA GACGAGGCTG
GTGCATTCCG GCACGCTGCG CTCGCAATAT GGCGAGACCT CCGACGCGCT GTTTCTCACC
CAGGGCTTCG TCTACGCCTC CGCCGAGCAA TGCGAGGCGC GCTTCACCGG CGACGACCCC
GGGTTCCAAT ATTCGCGGTT CTCCAACCCG ACGGTGTCGG CGTTCGAACA GCGCATGGCG
GAATTCGAGG GCGCCGAGGC CGCGCGCGCC ACCGCCACCG GCATGGCGGC GGTGACCGCG
GCGCTGTTGG CGCCGCTGCG CGCCGGCGAT CACGTGGTCG CTTCCAAGGC GATGTTCGGC
TCCTGCCGCT ACGTGGTGGA AGACCTGCTG CCGCGCTACG GCATCGAATC AACGCTGGTC
GACGGCCTCG ACCTCGATCA ATGGCAAAAG GCGCTGCGGC CCAACACCAA GACGTTCTTC
CTGGAAAGCC CGACCAATCC GACGCTCGAC GTGCTCGACA TCGGCGAGAT CGCCAAGATC
GCCCATGCCG GCGGCGCCCG CCTGGTAGTC GACAACGTGT TCGCGACCTC GCTGTGGCAG
AGCCCGCTCG AGCTCGGCGC CGACGTCGTG GTGTATTCGG CGACCAAGCA CATCGACGGC
CAGGGCCGCT GTCTCGGCGG CGTGGTGCTG GCGTCAAACG CCTTCATCGA AGAGCACATC
CAGATGTATC TGCGGCAGAC CGGGCCATCG CTGTCGCCGT TCAACGCCTG GGTGCTGCTG
AAAGGCTTGG AGACGCTGGC GATCCGGGTC GAGAAGCAGA CCACCAACGC CGCGGCGGTC
GCCGACGCGC TGGCCGGCCA TCCGAAGATC ACCCGGCTGA TCTATCCCGG CCGCGACGAC
CATCCGCAGG CCGTCACGGT GAAGAAGCAG ATGCGCGCCG GCTCGACGCT GGTCGGCTTC
GACGTCAAGG GCGGCAAGCA AGGCGCGTTC CGTTTCCTCA ACGCGCTGAA GCTGACGCTG
ATCAGCAACA ATCTCGGCGA CGCGCGCAGC CTGGTCACGC ACCCCGCGAC CACCACGCAC
CAGCGGCTGA AGCCGGAAGT CCGCGCCGAT CTCGGCATCA GCGAGGGCTT CATCCGCTAC
TCCGCCGGGC TCGAACACAA GGACGATCTG ATCGAGGATC TTTTGGCCGC GCTACAGCAG
GTGTAG
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| Protein sequence | MSETKTTAPS TSAYRRETRL VHSGTLRSQY GETSDALFLT QGFVYASAEQ CEARFTGDDP
GFQYSRFSNP TVSAFEQRMA EFEGAEAARA TATGMAAVTA ALLAPLRAGD HVVASKAMFG
SCRYVVEDLL PRYGIESTLV DGLDLDQWQK ALRPNTKTFF LESPTNPTLD VLDIGEIAKI
AHAGGARLVV DNVFATSLWQ SPLELGADVV VYSATKHIDG QGRCLGGVVL ASNAFIEEHI
QMYLRQTGPS LSPFNAWVLL KGLETLAIRV EKQTTNAAAV ADALAGHPKI TRLIYPGRDD
HPQAVTVKKQ MRAGSTLVGF DVKGGKQGAF RFLNALKLTL ISNNLGDARS LVTHPATTTH
QRLKPEVRAD LGISEGFIRY SAGLEHKDDL IEDLLAALQQ V
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