Gene RPC_4879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4879 
Symbol 
ID3973681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5447744 
End bp5448697 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content66% 
IMG OID637927991 
Productelectron transfer flavoprotein, alpha subunit 
Protein accessionYP_534720 
Protein GI90426350 
COG category[C] Energy production and conversion 
COG ID[COG2025] Electron transfer flavoprotein, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC TGCTGATTGC CGAACACGAC CACGCCGTCC TCAAGGATTC CACCAACAAG 
GCTTTGACCG CGGCGAGCCA GCTCGGCGCC GAGGTTCACG TCCTGGTGGC CGGCGGCGGT
GAAGGCACCA AGGCCGCGGC TGAAGCAGCC GCCAAGCTCG CCGGCGTGAC CAAAGTGCTG
GTCGCCGACG ACGCGCTCTA TGCGCACGAC CTGGCCGAGC CGCTGGCCGC GCTCATTGTC
GCGCTGGCGC CGAATTACGA TGCCTTCGTG GCGCCGGCGA CCTCGCGGTT CAAGAACGTG
ATGCCGCGCG TGGCCGCCCT GCTCGACGTC ATGCAGGTTT CGGAAATCAT CAAGGTGATT
GCTCCGGATA CCTTCGAGCG GCCGATCTAT GCCGGCAACG CGATCCAGAC CGTGAAGTCG
AAGGACGCCA AGAAAGTCAT TACCGTACGC ACCTCGACCT TCGCCGCGGC GCCGGGCGAG
GGCGGCAGTG CGGCGATCGA GAGCGTGGCG GCGGCGGCTG ATCCCGGCGT CTCCAGCTTC
GTCGGCGAGG AGGTCGCGAA AAGCGATCGG CCCGAACTGA CCTCGGCCAA GATCATCGTC
TCCGGCGGCC GCGCGATGCA AAGCCGCGAG AACTTCAGCA AATATATCGA GCCGTTGGCC
GACAAGCTCG GCGCCGGCGT CGGCGCTTCG CGCGCCGCGG TCGATGCCGG CTACGCCCCC
AACGACTGGC AGGTCGGCCA GACCGGCAAA GTGGTGGCGC CGGAGCTCTA CGTCGCGATC
GGCATTTCCG GGGCGATCCA GCATCTCGCC GGGATGAAGG ATTCCAAGGT GATCGTGGCG
ATCAACAAGG ACGAGGATGC GCCGATCTTC CAGGTCGCCG ACTACGGCCT GGTGGCGGAT
CTCTATCAGG CGGTGCCTGA ACTGACCGAG GCGCTCGGCA AGCTCGGGAA GTAA
 
Protein sequence
MTTLLIAEHD HAVLKDSTNK ALTAASQLGA EVHVLVAGGG EGTKAAAEAA AKLAGVTKVL 
VADDALYAHD LAEPLAALIV ALAPNYDAFV APATSRFKNV MPRVAALLDV MQVSEIIKVI
APDTFERPIY AGNAIQTVKS KDAKKVITVR TSTFAAAPGE GGSAAIESVA AAADPGVSSF
VGEEVAKSDR PELTSAKIIV SGGRAMQSRE NFSKYIEPLA DKLGAGVGAS RAAVDAGYAP
NDWQVGQTGK VVAPELYVAI GISGAIQHLA GMKDSKVIVA INKDEDAPIF QVADYGLVAD
LYQAVPELTE ALGKLGK