Gene RPC_4851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4851 
Symbol 
ID3973594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5412240 
End bp5413169 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content68% 
IMG OID637927963 
ProductPfkB 
Protein accessionYP_534692 
Protein GI90426322 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.733485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.689596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAA ACGCTCGCCG GCCGCGCGTG CTGTGCATCG GAATGCCGGT GCGTGATCTG 
ACGTTCCGGA TCGAACATCT TCCGGCGCTC GGCTCCAAGG CCTATGCCAG CCATTTCGCC
GAGATCTGCG GCGGCAACGC GGTCAACGCC GCGATCGCCA TAGCCCGGCT CGGCGGACGC
GCCGCGCTGG CCGGACCGAT CGGCGATCGC AACGAAAGCT CGAGCCGGTT CATCTTCGAC
AAGCTCGCCG AAGAGGCCAT CGACGCTACG GCCCTGGTGC ACATGCCGGG CCTGGTGACG
CCGGTCTCCT CAGTAATGTT CGATCCGTCG GGCGAACGCA CCATCGTCAC CTTTCGCGAT
CCCGGGCTGT GGCAGGTCGA GTTGCCCGAC ACGGAGGTTT TGCTCCGCGA CTGCGACGCG
CTGCTGGTGG AAAATCGCTG CGCTTCGTTC GCCACCGCGC TGTGTGCCGA GGCGCTGCGG
CGCGGCATCG CCGTGGTGGT CGACGTCGAC CGCGCGATGT CGCTGGATGA CGGGCTGCTG
ACCGCGGCCT CGCACCTGAT CTTTGCGCAG GAAGCGCTGC ACGCCACCGC CGGCGTCGCC
GATGATATCG ATGCACTGCG CGCCATCGCC AAACTGACGC CGGCCTTCGT CGCCGCGACG
CGCGGACCGC AGGGCACGAT TTGGCTCGAC GACCAGCGGC GCGTGCAAAA CACTCCGGCG
TTTCCGGTCG AGACCGTGGA TACGCTGGGC GCCGGCGACA TCTTCCATGG CGGCTTCGCG
CTGGCGATCA CCGAGCGGCA GAGTCTCGCC GACGCGCTGC GCTTCGGCTC CGCGGCGGCG
GCGCTGAAAT GCACGAAATT CGGCGGCGCC TTCGCCTGCC CGCGCCGCGC CGAGGTCGAC
GTGCTGTTGA GCCGGTCGAT CGCGTACTGA
 
Protein sequence
MTENARRPRV LCIGMPVRDL TFRIEHLPAL GSKAYASHFA EICGGNAVNA AIAIARLGGR 
AALAGPIGDR NESSSRFIFD KLAEEAIDAT ALVHMPGLVT PVSSVMFDPS GERTIVTFRD
PGLWQVELPD TEVLLRDCDA LLVENRCASF ATALCAEALR RGIAVVVDVD RAMSLDDGLL
TAASHLIFAQ EALHATAGVA DDIDALRAIA KLTPAFVAAT RGPQGTIWLD DQRRVQNTPA
FPVETVDTLG AGDIFHGGFA LAITERQSLA DALRFGSAAA ALKCTKFGGA FACPRRAEVD
VLLSRSIAY