Gene RPC_4829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4829 
Symbol 
ID3973533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5389833 
End bp5390708 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content65% 
IMG OID637927941 
Producthypothetical protein 
Protein accessionYP_534670 
Protein GI90426300 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATGC TGTATCAGGC GTTGATCGCG CCGTTCTTGG AGTTCGAATT CATGCGCCGG 
GCTCTGGCCG GCGTGTTGTC GCTGGCGCTG GGGGGCGCCC CGATCGGCGT CTTCATGATG
TTGCGGCGGA TGTCGCTGGC CGGCGACGCC ATGGCGCACG CCATCCTGCC CGGCGCCGCA
GTCGGCTTCC TGCTGTCCGG CCTCAATCTG TTCGCGATGA CGTTCGGCGG ACTGATCGCC
GGCTTCGCTG TGGCGATCCT GTCCGGCGTG GTGTCGCGGG CGACGGAATT GAAGGAAGAC
GCCTCGCTGG CGACCTTCTA TCTGGTCTCG CTGGCGCTCG GCGTCACCAT CGTGTCGATC
AAGGGCAGCA ACATCGACCT GTTGCACGTG CTGTTCGGCA ACATCCTGGC GATGGACGAC
CAGACCCTCT TGGTGATCGC CTTCAACGCT ACGCTGACGC TGCTGGTGTT GGCGCTGATC
TTCCGTCCGC TGGTGATCGA ATGCGTCGAT CCGGTGTTCC TGCGTAGCGT CAGCCGGGCC
GGCGGCCCGG CGCATCTGAT CTTTATGGCG CTCGTGGTGA TCAATCTGGT CAACGGCTTC
CATGCGCTCG GCACGCTCTT GGCGGTCGGG CTGATGATCC TGCCCGCGGG AATCGCCCGG
TTCTGGTCGC GCGACATCAC CGGGATGATC TGCATCGCGG TCGCCAGCGC CATGGCCTCC
GGCTACGCCG GACTGGTGCT GTCGTTCCAA ACCAAAGTGC CATCGGGCCC GGCGATCATC
CTGATGGCGG CACTGCTTTA TGTCGTCTCG GTGCTGTTCG GCTCTGCCGG CGGCATCCTC
CGGCGGCTGT TTCCCGGCCG TCACCTCGAA GCCTGA
 
Protein sequence
MDMLYQALIA PFLEFEFMRR ALAGVLSLAL GGAPIGVFMM LRRMSLAGDA MAHAILPGAA 
VGFLLSGLNL FAMTFGGLIA GFAVAILSGV VSRATELKED ASLATFYLVS LALGVTIVSI
KGSNIDLLHV LFGNILAMDD QTLLVIAFNA TLTLLVLALI FRPLVIECVD PVFLRSVSRA
GGPAHLIFMA LVVINLVNGF HALGTLLAVG LMILPAGIAR FWSRDITGMI CIAVASAMAS
GYAGLVLSFQ TKVPSGPAII LMAALLYVVS VLFGSAGGIL RRLFPGRHLE A