| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4822 |
|---|
| Symbol | |
|---|
| ID | 3973526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 5380550 |
|---|
| End bp | 5381221 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637927934 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_534663 |
|---|
| Protein GI | 90426293 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCA CACCCAGCAC GCACCTCATC ATTGCCGATG ATCATCCGCT ATTTCGTGAC
GCCCTGCGGC ACGCGGTCGC AAGCGTCGTC CCCACCGCCA AGATCGGCGA GGCCGGAACC
TTCGAGGAAC TGACGGCGAT CCTAGAACAG GAGGCCGATG TCGATCTGGT CCTTTTGGAT
CTGTCGATGC CGGGAATCAG CGGATTTTCC GGACTGATCT ACTTGCGGGC GCAGTATCCG
GCGATTCCGG TGGTGGTGGT CTCGGCCAGC GACGACGTCG GCACCATCCG CCGCTCGCTG
GATTTCGGAG CCTCCGGCTT CGTGCCGAAG CGCTTCGGGG TGGAGAAGCT GAAGGACGCG
ATCCAGAAGG TGCTGGATGG AGACGTCTGG GTTCCGCCGG ACATCGACCT CAACGCCGCC
TCCGATCCGG AAATGACCAA GCTGCGCGAC CGGCTGATCA CGCTGACCCC GCAGCAGGTC
CGGGTGCTGA TGATGCTGTC GGAAGGGCTG CTCAACAAGC AGATCGCCTA CGAGCTCGGC
GTCTCGGAAG CCACCATCAA GGCCCACGTC TCGGCGATTT TGCAGAAGCT CGGCGTCGAA
AGCCGGACCC AGGCGGTGAT CGCCGCCGCC AAGATCTCCG GCAGCCAATG GCGCCAGGAC
ACCCCGCAGT AA
|
|---|
| Protein sequence | MTPTPSTHLI IADDHPLFRD ALRHAVASVV PTAKIGEAGT FEELTAILEQ EADVDLVLLD
LSMPGISGFS GLIYLRAQYP AIPVVVVSAS DDVGTIRRSL DFGASGFVPK RFGVEKLKDA
IQKVLDGDVW VPPDIDLNAA SDPEMTKLRD RLITLTPQQV RVLMMLSEGL LNKQIAYELG
VSEATIKAHV SAILQKLGVE SRTQAVIAAA KISGSQWRQD TPQ
|
|---|
| |