| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4821 |
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| Symbol | |
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| ID | 3973525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5378560 |
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| End bp | 5380224 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637927933 |
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| Product | general substrate transporter |
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| Protein accession | YP_534662 |
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| Protein GI | 90426292 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACGA TTGCTGTTGC ACCAGCCCGT ACGGGAGGGA TGACGAAGGA CGAACGTTTC
GTCATTCTCG CGTCATCACT CGGCACGGTA TTCGAGTGGT ATGATTTTTA CCTCTACGGT
TCACTTGCCA GCATTATCGG CGCGCAGTTC TTCAGCGCCT ATCCGCCGGC CACCCGCGAC
ATCTTCGCGC TGCTCGCCTT CGCCGCGGGC TTCCTGGTCC GCCCGTTCGG TGCCATCGTG
TTCGGCCGCA TCGGCGATAT CGTCGGCCGC AAATATACCT TCCTGGTCAC CATCCTGATC
ATGGGTCTGT CGACCTTCAT CGTCGGTCTG TTGCCCAACG CGGCGACCAT CGGCATCGCG
GCGCCGATCA TCCTGATCGG TCTGCGGCTG TTGCAGGGCC TGGCGCTCGG CGGCGAATAC
GGCGGGGCAG CGACCTATGT CGCCGAGCAC TCGCCGCCCG GCAAACGCGG TTACTACACC
TCATTCATCC AGACCACGGC GACGCTCGGA CTCTTTCTCT CGCTGATCGT GATCCTGTTT
ACCCGCACCA TTCTCGGCGA GCCGGAATTC GCAGCCTGGG GCTGGCGTAT TCCGTTCCTG
GTGTCGGTGC TGCTGCTCGG CGTTTCGGTC TGGATCCGGC TGAAGCTGAA TGAGTCGCCG
GTGTTCCAGA AGATGAAGGA CGAAGGCAAG AGCTCGAAAG CGCCCTTGAC CGAAGCCTTT
GCCAACTGGG GCAACGCCAA GATCGTGCTG ATCGCCTTGA TCGGCGGCAC CATGGGCCAG
GGCGTGGTGT GGTACACCGG CCAGTTCTAC GCGCTGTTCT TCCTGCAATC GATCCTCAAG
GTTGACGGCT ATACCTCCAA CCTGTTGATC GCCTGGTCGC TGTTGTTCGG GACCGGCTTC
TTCATCTTCT TCGGCTGGCT GTCGGACAAA ATCGGCCGTA AGCCGATCAT TCTGACCGGC
TGCTTGATCG CGGCGCTGAG CTTCTTCCCG ATCTTCCGGA TGATCACCTC CAACGCCAAC
CCGGCGTTGG AAAAGGCCAT CGAGACCGTG AAGGTCGAGG TTGTGTCCGA TCCTGCGCTG
TGCGGCGATC TGTTCAACCC GGTCGGCACC CGCGTGTTCA CCGCGCCTTG CGACACCGCG
CGGGCCTATC TGGCGCAGTC CTCGGTGAAG TACTCGACCG CCTACGGTCC GGCCGGCTCC
GGCGTCAAGG TCGTCGTCAA CGGCACCGAG GTACCTTACG TCGACGCCAA GACCTCCAAT
CCGGCGGTGC TGGCGGCGGT TCAGGGCGCC GGCTATCCGA AGGCGGGTAA CGCCGACATC
GTCAAGATGT CGAACCCGTT CGACATCTTC AAGCCGCAGG CCGCGGCGGT GATCGGGCTG
CTGTTCATCT TGGTGCTGTT CGTCACCATG GTGTACGGGC CGATCGCGGC GATGCTGGTC
GAACTGTTCC CGACCAGGAT CCGCTACACC TCGATGTCGC TGCCCTATCA CATCGGCAAC
GGCTGGTTCG GCGGCTTGCT GCCGGCGACC GCCTTCGCCA TCGTGGCCTC GACCGGCGAT
ATCTATGCCG GCCTGTGGTA CCCGATCATC TTCGCCTTGA TCACCTTCGT CGTCGGTCTG
ATCTTCATGC CGGAGACCAA GAACGTCGAT ATCGGTCGCA GCTAA
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| Protein sequence | MSTIAVAPAR TGGMTKDERF VILASSLGTV FEWYDFYLYG SLASIIGAQF FSAYPPATRD
IFALLAFAAG FLVRPFGAIV FGRIGDIVGR KYTFLVTILI MGLSTFIVGL LPNAATIGIA
APIILIGLRL LQGLALGGEY GGAATYVAEH SPPGKRGYYT SFIQTTATLG LFLSLIVILF
TRTILGEPEF AAWGWRIPFL VSVLLLGVSV WIRLKLNESP VFQKMKDEGK SSKAPLTEAF
ANWGNAKIVL IALIGGTMGQ GVVWYTGQFY ALFFLQSILK VDGYTSNLLI AWSLLFGTGF
FIFFGWLSDK IGRKPIILTG CLIAALSFFP IFRMITSNAN PALEKAIETV KVEVVSDPAL
CGDLFNPVGT RVFTAPCDTA RAYLAQSSVK YSTAYGPAGS GVKVVVNGTE VPYVDAKTSN
PAVLAAVQGA GYPKAGNADI VKMSNPFDIF KPQAAAVIGL LFILVLFVTM VYGPIAAMLV
ELFPTRIRYT SMSLPYHIGN GWFGGLLPAT AFAIVASTGD IYAGLWYPII FALITFVVGL
IFMPETKNVD IGRS
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