| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4788 |
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| Symbol | |
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| ID | 3972991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 5349195 |
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| End bp | 5350817 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637927900 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_534629 |
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| Protein GI | 90426259 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAATGG AAACTGCACG GGTTGCTCAC TCCGACCACG CCGACGAACA CGCCCACGCT
CATCCGACCG GCTGGCGGCG CTACGTCTAT TCCACCAACC ACAAAGACAT CGGCACGATG
TATCTGATCT TCGCGATCGT CGCCGGGCTG ATCGGCGGCG CGATGTCGAT CGCGATCCGC
ATCGAGCTGA TGTATCCCGG CGTGCAGATC TTCCACGAAA GCCACACCTA CAACGTGTTC
GTCACCTCGC ACGGCCTGAT CATGATCTTC TTCATGGTGA TGCCGGCGAT GATCGGCGGC
TTCGGCAACT GGTTCGTGCC GCTGATGATC GGCGCGCCCG ACATGGCGTT TCCGCGGATG
AACAACGTCT CGTTCTGGCT GTTGCCGGCC TCCTTCGCGC TGCTGCTGAC CTCGACCTTC
GTCGAGGGCG AGCCGTCGTC GAACGGCGTC GGCGCCGGCT GGACGATGTA TGCGCCGCTG
TCGACCTCCG GCCATCCCGG GCCGGCGGTG GACTTCGCGA TCCTGGCGCT GCATCTCGCC
GGCGCGTCCT CGATCCTCGG CGCGATCAAC TTCATCACCA CGATCTTCAA CATGCGCGCG
CCCGGCATGA CGCTGCACAA GATGCCGCTG TTCGTGTGGT CGATCCTGGT CACGGTGTTC
CTGCTGCTGC TGGCGCTGCC GGTGTTGGCC GGTGCCATCA CCATGCTGCT CACCGACCGC
AATTTCGGCA CCACGTTCTT CTCCGCGGAA GGCGGCGGCG ATCCGGTGCT GTTCCAGCAT
CTGTTCTGGT TCTTCGGCCA CCCCGAAGTC TACATCCTGA TTTTGCCGGG CTTCGGCATG
ATCAGCCAGA TCGTCTCGAC CTTCTCGAAA AAGCCGGTGT TCGGCTATCT GGGCATGGCC
TACGCCATGG TGGCGATCGG CGTGATCGGC TTCGTGGTCT GGGCGCATCA CATGTACACG
GTGGGCATGT CGAGCGCGAC GCAGGCCTAC TTCGTCGCCG CCACCATGGT GATCGCGGTG
CCGACCGGGG TGAAGATCTT CTCCTGGATC GCCACGATGT GGGGCGGCTC GATCGAATTC
CGCACGCCGA TGCTGTGGGC GATCGGCTTC ATCTTCCTGT TCACGGTCGG CGGCGTCACC
GGCGTGGTGC TGGCCAATGC CGGCGTCGAT CGCGTGCTGC AAGACACCTA TTACGTGGTG
GCGCATTTCC ACTACGTGCT GTCGCTGGGC GCGGTGTTCG CGATCTTCGC CGGCTGGTAC
TACTGGTTCC CGAAGATGAC AGGCTACATG TATAACGAGA CCATCGGCAA GCTGCACTTC
TGGGTCACCT TCATCGGCGT CAATCTGGTG TTCTTCCCGC AGCATTTCCT CGGCCTGTCC
GGCATGCCGC GGCGCTACGT CGACTATCCA GACGCCTTCG CCGGCTGGAA TCTGGTGTCC
TCGATCGGCT CCTACATCTC CGGCTTCGCG GTGCTGATCT TCCTCTACGG CATGGTGCTG
GCGTTCATCA AAAAGGAAAA GGCCGCCGAC AATCCGTGGG GGCCGGGCGC CACCACGCTG
GAATGGACCT TGTCATCGCC GCCGCCGTTC CATCAGTTCG AAATTCTGCC GCGGGTTCGC
TGA
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| Protein sequence | MVMETARVAH SDHADEHAHA HPTGWRRYVY STNHKDIGTM YLIFAIVAGL IGGAMSIAIR
IELMYPGVQI FHESHTYNVF VTSHGLIMIF FMVMPAMIGG FGNWFVPLMI GAPDMAFPRM
NNVSFWLLPA SFALLLTSTF VEGEPSSNGV GAGWTMYAPL STSGHPGPAV DFAILALHLA
GASSILGAIN FITTIFNMRA PGMTLHKMPL FVWSILVTVF LLLLALPVLA GAITMLLTDR
NFGTTFFSAE GGGDPVLFQH LFWFFGHPEV YILILPGFGM ISQIVSTFSK KPVFGYLGMA
YAMVAIGVIG FVVWAHHMYT VGMSSATQAY FVAATMVIAV PTGVKIFSWI ATMWGGSIEF
RTPMLWAIGF IFLFTVGGVT GVVLANAGVD RVLQDTYYVV AHFHYVLSLG AVFAIFAGWY
YWFPKMTGYM YNETIGKLHF WVTFIGVNLV FFPQHFLGLS GMPRRYVDYP DAFAGWNLVS
SIGSYISGFA VLIFLYGMVL AFIKKEKAAD NPWGPGATTL EWTLSSPPPF HQFEILPRVR
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