| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4751 |
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| Symbol | tolB |
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| ID | 3972727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5316908 |
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| End bp | 5318260 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637927863 |
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| Product | translocation protein TolB |
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| Protein accession | YP_534592 |
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| Protein GI | 90426222 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTGA TGTCGTCCCG TCTTCCCGCT CTGCCGCTGA GCCGTCGCCA GGCCTTGCTC
GGCGGCGCCG GCTCCGCCGC CGCCTTGCTG CTGCCCGGTG GCGCGCAGGC GCAGACCAGG
CTGCAGATCA CCGAGGGCAA CGTCGCCCCG ATGCCGATCG CGATTCCGAA TTTCGTCGCC
GGCACGCCGG CCGACAACGA GGTCGGCCTT GGCGTGGCCC AGGTGATCAC CAACAACCTG
AAGCGCAGCG GGCTGTTCGC GCCGATCGAT CAGGCGGCCT TCATCGAGCG GATCAGCAAT
ATCGACACCC CGCCGCAGTT TCAGAGCTGG AAGACCATCA ACGCCCAGGC GCTGGTGACC
GGCCGCATGA CCAAGCAGGG CGACGGCCGG CTGAAAGCCG AGTTCCGGCT GTGGGATGTG
GCGGCCGGCC AGCAACTCAC CGGCCAGCAA TATTTCACCT CGCCGGAATA TTGGCGGCGC
ATCGCCCATA TCATCTCCGA TCAGATCTAC GAGCGGCTGA CCGGCGAGAA GGGCTATTTC
GACAGCCGTG TGGTGTTCAT CGACGAGACC GGCTCCAAGG AACGCCGCGT CAAGCGGCTG
GCCTTGATGG ATCAGGACGG CGCCAATGTG CGCTATCTGA CCCGCGGCGC CGATCTGGTG
CTGACGCCGA GGTTCTCGCC GTCGACCCAA GAGATCACCT ATATGGAATT CGGCCAGGGC
GACCCCAGGG TCTATCTGTT CAACATCGAG ACCGGGCAGC GCGAGATCGT CGGCAATTTT
CCCGGCATGT CGTTTTCGCC GCGGTTTTCG CCGGACGGCC AGCGCGTCAT CATGAGCCTG
CAGCAGGGCG GCAACTCCAA CCTGTTCGTG ATGGATCTGC GCTCCAAGTC CACCACCCGG
CTGACCGATA CGCCGGCGAT CGACACCTCG CCGTCCTATG CGCCGGACGG CAGCAAGATC
TGCTTCGAGA GCGATCGCGG CGGCAAGCCG CAGATCTATG TGATGCCCGC CGGCGGCGGC
GGCGCGCAGC GGATTTCGTT CGGCGAGGGC AGCTATTCGA CCCCGGTGTG GTCGCCGCGC
GGCGACTACA TCGCCTTCAC CAAGCAGGGC GGTGGGCAGT TTTCGATCGG CATCATGAAG
CCCGACGGCT CCGGCGAGCG GCTGCTGACC TCCGGCTATC ACAACGAGGG CCCGACGTTT
GCGCCGAACG GCCGCGTGCT GATGTTCTTC CGCGACCCCG GCGGCAATGG CGGTCCCTCG
TTGTTCACGG TCGATATCTC CGGCCGCAAC GAACAGAAGG TGCCGACCCC GGGCTTCGCC
TCCGACCCGG CGTGGTCGCC GCTGCTGTCC TGA
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| Protein sequence | MSVMSSRLPA LPLSRRQALL GGAGSAAALL LPGGAQAQTR LQITEGNVAP MPIAIPNFVA
GTPADNEVGL GVAQVITNNL KRSGLFAPID QAAFIERISN IDTPPQFQSW KTINAQALVT
GRMTKQGDGR LKAEFRLWDV AAGQQLTGQQ YFTSPEYWRR IAHIISDQIY ERLTGEKGYF
DSRVVFIDET GSKERRVKRL ALMDQDGANV RYLTRGADLV LTPRFSPSTQ EITYMEFGQG
DPRVYLFNIE TGQREIVGNF PGMSFSPRFS PDGQRVIMSL QQGGNSNLFV MDLRSKSTTR
LTDTPAIDTS PSYAPDGSKI CFESDRGGKP QIYVMPAGGG GAQRISFGEG SYSTPVWSPR
GDYIAFTKQG GGQFSIGIMK PDGSGERLLT SGYHNEGPTF APNGRVLMFF RDPGGNGGPS
LFTVDISGRN EQKVPTPGFA SDPAWSPLLS
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