| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4744 |
|---|
| Symbol | |
|---|
| ID | 3972720 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 5309431 |
|---|
| End bp | 5310471 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637927856 |
|---|
| Product | tRNA(Ile)-lysidine synthetase-like |
|---|
| Protein accession | YP_534585 |
|---|
| Protein GI | 90426215 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
|---|
| TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.925373 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACG ACGACCACAC ACCGATTACC GCGCAGCAGG CCAAGCAGTT GTTCGCCGAC
TGGCGCGACG CCAAGGCTGT CGTGCTGGCG GTGTCGGGGG GGCCGGATTC GTTGGCGTTG
ATGTGGCTGG CGGCGCGCTG GCGCAAAGCG CTGCGGCGCG GTCCGGCCAT TTCGGTGATC
ACCGTCGACC ACGGTCTGCG CCCGGAAGCC GCGCGTGAGG CGCGCGACGT CAAGCGCCAT
GCCGCCGAAC TCGATCTGCC GCATCGGACG CTGCGCTGGC GCGGTGATAA GCCGAGTACG
GGAGTACCAG CCGCGGCCCG CGAAGCGCGC TATCAGCTGC TGGCGCGGGC CGCCCGCGCG
GCCGGGGCCA GCCACGTGAT GACCGCCCAC ACCCGGGACG ACCAAGCCGA GACCTTGCTG
ATGCGGATGT CGCGCGGCAG CGGCATCGCC GGCCTGGCGG CGATGGCGCG GCAGACCGAA
CGCTTCGGGG TGATCATCGC GCGGCCGCTG CTTGAGGTGT CAAAAGCCCA ACTGGTGGCG
ACGCTGGACA AGGCGAAGAT CGGTTTTGCC ACCGACCCCA GCAATACCGA TCCGCGCTAT
GCGCGGCCGC GGCTGCGCGG CCTGATCGCG GCTTACGCCG AGGAGGGGTT CGACGCGCGC
AATCTGGCCC GGCTGGCGTC GCGACTGGCG CGCGCCAACG CCGCGCTCGA GGTTCTGGCG
GACGGCGCCG AACAATTCCT GGCGCTGCGC GATAATGATT CCGCCCAGCC AGGCTGCGAT
GCGCGGGCGT TTGCCGCCTT GCCGGCGGAG ATCAAGGTGC GTTTATTGCT ACGCACCATC
GATCGCCTCG GTGATGAGGG GCCTGCGGAA CTCGGCAAGG TCGAGACCCT GGTGGCTGAA
ATTGACCGCG CGATCGCCCA AAACAGCGGC GGTCACGGCC GAATCGCGCT GAAACAGACG
CTTGCAGGTG CGCTGATCAC GCTGGGCCGG GACCGGTTGC GGATCGAAAC GGCGCCGCCG
CGCAGGCGCC GCAGCGGCTG A
|
|---|
| Protein sequence | MADDDHTPIT AQQAKQLFAD WRDAKAVVLA VSGGPDSLAL MWLAARWRKA LRRGPAISVI
TVDHGLRPEA AREARDVKRH AAELDLPHRT LRWRGDKPST GVPAAAREAR YQLLARAARA
AGASHVMTAH TRDDQAETLL MRMSRGSGIA GLAAMARQTE RFGVIIARPL LEVSKAQLVA
TLDKAKIGFA TDPSNTDPRY ARPRLRGLIA AYAEEGFDAR NLARLASRLA RANAALEVLA
DGAEQFLALR DNDSAQPGCD ARAFAALPAE IKVRLLLRTI DRLGDEGPAE LGKVETLVAE
IDRAIAQNSG GHGRIALKQT LAGALITLGR DRLRIETAPP RRRRSG
|
|---|
| |