| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4731 |
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| Symbol | |
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| ID | 3972707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 5294101 |
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| End bp | 5295840 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637927843 |
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| Product | ABC transporter-like |
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| Protein accession | YP_534572 |
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| Protein GI | 90426202 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.612585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.660257 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACAATA TCCGCTCCAC CCTCGCGACC GTCTGGCGGA TCGCGGCGCC GTATTACCGT
TCCGACGACA AATGGATGGC CTGGGGGCTG TTGTCGGCGG TGATCGCCAT CGAACTCGCC
GTGGTCGGCC TGATGGTGTT GTTCAACCGC TGGAACAACG TGTTCTACAA CGCGCTGCAG
GAGAAGAACT TCGACGTCTT CACCTATCAG ATCGGGTATT TCTGCGTGCT GGCGGCGATC
TTCATCGCGC TCAAGGTCTA CCAGCTCTAT CTGAACCAGT GGCTGCAGAT CCGCTGGCGC
CGCTTCATGA CCGAGCGCTA TCTCGGCGGC TGGCTGCACG ACGCCCGGCA TTACCAGATG
CAGCTCTTGG GCGACGCCGC CGACAACCCG GATCAGCGCA TCGCCGAGGA CACCCAGCTG
TTCGTCGAAC GCACGCTGGC GCTCGGCGTC GGGCTGCTGA GCTCGATCGT GACGCTGGGC
TCGTTCGTGG TGATCCTGTG GGGGCTGTCG GAGGCGGCGC CGCTGCATGT GTTCGGCCGC
GACATTCCGA TTCCCGGCTA TCTGGTGTGG GGTGCCTTGA TCTACGCCAT CATCGGCACC
TGGCTGACCC ACCTGATCGG CTGGCCGCTG GTCGGACTGA ACTTCCAACA GCAGCGCTTC
GAGGCGGATT TCCGCTTCAA CCTGGTGCGC GCCCGCGAAA ACTCCGAACA GATCGCGCTG
TTGCGCGGCG AGCCCGCCGA ACGCGAGCGG CTGGCGGTGC GATTTTCCCG GGTGGTGGAA
AACTGGCTCG GCATCATGAC CCGCACCAAG AAGCTGACGG CGTTCACCGC GAGCTACTCG
CAGGCCTCGA TCATCTTCCC CTACATCCTA GTGGCGCCGG CGTATTTCGC CGGCAAGGTG
CAGCTCGGCG GGATGATGCA GACCGCCTCC GCCTTCGGCA GCGTGCAGGA CGCGCTGTCG
TTCTTCATCA CCGCCTACCG CACGCTGGCG GAATGGCAGG CGGTGGTGGC GCGGCTCGAT
GGGTTCGAGC GCTCGATCGA GACCGTGACC GCGCTGGCCG CCGAGGCCGA TCTGGTTCAC
GTCGCCACCG CCGAGAGCTC CGGCATCGCC TTCAACAAGC TGGCGGTCAA GCTGCCGGAC
GGCACCGCGC TGGTCAGCGC CGACGGCGTG CAATTGCGCG GCGACCAGCG CACGCTGATC
ACCGGCCCGT CGGGCTCTGG CAAATCAACG CTGTTCCGCG CCATCGCCGG GATCTGGCCG
TTCGGCTCCG GCCGCGTCGT GGTGCCGACC GGCGCCACGC TGATGATGCT GCCGCAGCGG
CCGTATTTTC CGGTCGGGCC GCTCGACGCG GCGGTCAGCT ACCCGGCGGA AACCGGCAGC
TACGCCGCGG CGCAACTGAG CGAGGCGATC ACCGCGGTCG GGCTGCCGGC GCTGGCTTCG
CGGCTCGAGC AACACGCCCA TTGGAACCGG ATGCTGTCGC TTGGCGAACA GCAACGGCTC
GGCCTCGCCC GCGCCCTGCT GCACAAGCCG GACTATCTGT TCCTCGACGA GGCCACCGCC
TCGCTGGACG AGCCGTCGGA AGCCGCGCTC TACCGGCTGC TGGCAGAGCG GCTGCCGGGC
ACCACCGTGG TCTCGATCGG GCATCGCTCG ACGCTCAACG CCTTCCATCA GCGCGACATG
ACGCTGGCCC GCGACGGCAG CCACTTCGCG CTGAAGGATC AGGTCAGGCT GCCGGCGTGA
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| Protein sequence | MNNIRSTLAT VWRIAAPYYR SDDKWMAWGL LSAVIAIELA VVGLMVLFNR WNNVFYNALQ
EKNFDVFTYQ IGYFCVLAAI FIALKVYQLY LNQWLQIRWR RFMTERYLGG WLHDARHYQM
QLLGDAADNP DQRIAEDTQL FVERTLALGV GLLSSIVTLG SFVVILWGLS EAAPLHVFGR
DIPIPGYLVW GALIYAIIGT WLTHLIGWPL VGLNFQQQRF EADFRFNLVR ARENSEQIAL
LRGEPAERER LAVRFSRVVE NWLGIMTRTK KLTAFTASYS QASIIFPYIL VAPAYFAGKV
QLGGMMQTAS AFGSVQDALS FFITAYRTLA EWQAVVARLD GFERSIETVT ALAAEADLVH
VATAESSGIA FNKLAVKLPD GTALVSADGV QLRGDQRTLI TGPSGSGKST LFRAIAGIWP
FGSGRVVVPT GATLMMLPQR PYFPVGPLDA AVSYPAETGS YAAAQLSEAI TAVGLPALAS
RLEQHAHWNR MLSLGEQQRL GLARALLHKP DYLFLDEATA SLDEPSEAAL YRLLAERLPG
TTVVSIGHRS TLNAFHQRDM TLARDGSHFA LKDQVRLPA
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