| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4692 |
|---|
| Symbol | |
|---|
| ID | 3972398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 5254003 |
|---|
| End bp | 5254935 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637927804 |
|---|
| Product | heat shock protein HtpX |
|---|
| Protein accession | YP_534533 |
|---|
| Protein GI | 90426163 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTATT TCAAGACCGC AATTCTGCTG GCCGGGCTGA CCGCGCTGTT CATGGGCGTC
GGCTATCTGA TCGGCGGGGC CTCGGGCGCC GCGATCGCGC TCGTGGTCGC CGCGGCCACC
AACATCTTCG CCTATTGGAA CTCGGACAAG ATGGTGCTGT CGATGTACGG CGCCCAACAG
GTCGACGCGC GCAACGCGCC GGATCTGCTG CGGCTGGTCG CCGACCTCGC CAGCAACGCG
CAATTGCCGA TGCCGCGGGT GTTCATCATG GACAATCCGC AGCCGAATGC GTTTGCGACA
GGGCGCAATC CGGAGAACGC CGCAGTCGCG GTGACCACCG GCCTGATGCA GCAGTTGTCC
CGCGAAGAAC TCGCCGGCGT GATCGCCCAT GAACTCGCGC ATGTGAAGAA CCACGACACC
CTGCTGATGA CCGTCACCGC GACCATCGCC GGCGCAATCT CGATGCTGGC GCAGTTCGGC
ATGTTCTTCG GCGGCAACCG CGACAACAAC AATGGCGGGC TCGGCATCAT CGGCTCGATC
GTGATGATGA TCGTGGCGCC GTTGGCCGCG ATGCTGGTGC AGATGGCGAT CAGCCGCAGC
CGCGAATACG CCGCCGACGA TCTCGGCGCG CGGATCTGCG GCGAGCCGCG CTGGCTGGCT
TCGGCGCTGG CCAAGATCGA CAACGCCGCG CATCAGGTGC CGAACTACGA GGCCGAACGG
GCGCCCGCCA CCGCGCATAT GTTCATCATC AACCCGCTCA CCGGCCAGGG CATGGACAAT
CTGTTCGCCA CCCACCCCTC GACCGAAAAC CGCATCGCCG CGCTGACGCG GCTTGCCGGC
GAACTCGCGC CGCGCGGACC GGCGCGCGCC GCCACCGCCG CGCCGCGCGG GCCGTGGAGC
GGCCAGCCGC GTAGCCGCGG GCCGTGGGGT TAG
|
|---|
| Protein sequence | MSYFKTAILL AGLTALFMGV GYLIGGASGA AIALVVAAAT NIFAYWNSDK MVLSMYGAQQ
VDARNAPDLL RLVADLASNA QLPMPRVFIM DNPQPNAFAT GRNPENAAVA VTTGLMQQLS
REELAGVIAH ELAHVKNHDT LLMTVTATIA GAISMLAQFG MFFGGNRDNN NGGLGIIGSI
VMMIVAPLAA MLVQMAISRS REYAADDLGA RICGEPRWLA SALAKIDNAA HQVPNYEAER
APATAHMFII NPLTGQGMDN LFATHPSTEN RIAALTRLAG ELAPRGPARA ATAAPRGPWS
GQPRSRGPWG
|
|---|
| |