| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4688 |
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| Symbol | |
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| ID | 3972394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 5248433 |
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| End bp | 5249158 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637927800 |
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| Product | nuclease (SNase-like) |
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| Protein accession | YP_534529 |
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| Protein GI | 90426159 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTGACGA GATTTGGGTT GGCGATCGCG CTGCTGCTGT CGCCGGTGTT GGCCGAGGCC
GCCGACGTCA GCGGCGTGCC GAAGATCCGC GAAGGCGATC AGGTGACCAT CGGCAGCAGC
CGCATCCGGC TCGGCGGCAT CGACGCCCCC TCGCTGGATC AGCTCTGCCT CAACCCGAAG
GGCGAGCGCT GGAGTTGCGG CGTGGCGGCG CGCGACGAGC TGGTGCGCCA CGCCGGCAGC
AAGTCGTGGA GCTGCCACAT CCAGCGCACC GACCGCTTCG GCCGTTCGGT GGGGCGCTGC
GAGGTCGAAG GCGAGGACAT CCAGAAATGG CTGGTGCAGA GCGGCTGGGC GCTGGCCTAT
GCGAAGATCT CGCACGACTA CGACGCCGAC CAGAAGGTGG CGCGCGACGC CAAGGCCGGG
TTGTGGGCCG GCGCCTTCAT CGCGCCGTGG GATTGGCGGG TGCGCAACAA GGCCACCACC
ATCCTCGGCG CCGTCAAGCC GCCGCCGACC GCCAACGCCA TCCTGCTGGC CTCGGCGTCG
GGCCCGGTGG CGCCGTCGCC GGAGTGCACC ATCAAGGGCA ACGTCAACCG CTCCGGGCAT
TGCATCTATC ATCGCCCGCA AAGCCGCTGG TACGCCAAGA TCCAGATGCA CGTCAGCAAG
GGCACCCGCT GGTTCTGTTC GGTCGAAGAG GCCGAAGCCG CGGGATGCCG CGAGACCAGG
CGGTAA
|
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| Protein sequence | MVTRFGLAIA LLLSPVLAEA ADVSGVPKIR EGDQVTIGSS RIRLGGIDAP SLDQLCLNPK
GERWSCGVAA RDELVRHAGS KSWSCHIQRT DRFGRSVGRC EVEGEDIQKW LVQSGWALAY
AKISHDYDAD QKVARDAKAG LWAGAFIAPW DWRVRNKATT ILGAVKPPPT ANAILLASAS
GPVAPSPECT IKGNVNRSGH CIYHRPQSRW YAKIQMHVSK GTRWFCSVEE AEAAGCRETR
R
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