Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4688 |
Symbol | |
ID | 3972394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 5248433 |
End bp | 5249158 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637927800 |
Product | nuclease (SNase-like) |
Protein accession | YP_534529 |
Protein GI | 90426159 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGACGA GATTTGGGTT GGCGATCGCG CTGCTGCTGT CGCCGGTGTT GGCCGAGGCC GCCGACGTCA GCGGCGTGCC GAAGATCCGC GAAGGCGATC AGGTGACCAT CGGCAGCAGC CGCATCCGGC TCGGCGGCAT CGACGCCCCC TCGCTGGATC AGCTCTGCCT CAACCCGAAG GGCGAGCGCT GGAGTTGCGG CGTGGCGGCG CGCGACGAGC TGGTGCGCCA CGCCGGCAGC AAGTCGTGGA GCTGCCACAT CCAGCGCACC GACCGCTTCG GCCGTTCGGT GGGGCGCTGC GAGGTCGAAG GCGAGGACAT CCAGAAATGG CTGGTGCAGA GCGGCTGGGC GCTGGCCTAT GCGAAGATCT CGCACGACTA CGACGCCGAC CAGAAGGTGG CGCGCGACGC CAAGGCCGGG TTGTGGGCCG GCGCCTTCAT CGCGCCGTGG GATTGGCGGG TGCGCAACAA GGCCACCACC ATCCTCGGCG CCGTCAAGCC GCCGCCGACC GCCAACGCCA TCCTGCTGGC CTCGGCGTCG GGCCCGGTGG CGCCGTCGCC GGAGTGCACC ATCAAGGGCA ACGTCAACCG CTCCGGGCAT TGCATCTATC ATCGCCCGCA AAGCCGCTGG TACGCCAAGA TCCAGATGCA CGTCAGCAAG GGCACCCGCT GGTTCTGTTC GGTCGAAGAG GCCGAAGCCG CGGGATGCCG CGAGACCAGG CGGTAA
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Protein sequence | MVTRFGLAIA LLLSPVLAEA ADVSGVPKIR EGDQVTIGSS RIRLGGIDAP SLDQLCLNPK GERWSCGVAA RDELVRHAGS KSWSCHIQRT DRFGRSVGRC EVEGEDIQKW LVQSGWALAY AKISHDYDAD QKVARDAKAG LWAGAFIAPW DWRVRNKATT ILGAVKPPPT ANAILLASAS GPVAPSPECT IKGNVNRSGH CIYHRPQSRW YAKIQMHVSK GTRWFCSVEE AEAAGCRETR R
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