| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4645 |
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| Symbol | |
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| ID | 3972234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5193842 |
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| End bp | 5196688 |
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| Gene Length | 2847 bp |
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| Protein Length | 948 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637927757 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_534486 |
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| Protein GI | 90426116 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTGA TTCACGAAAT CGATTTCGGC ACGCCGCGCT CCACCTCAAC GACCATGGTG
ACGCTGTCGA TCGACGGCCA GAGCGTCACG GTGCCGGAAG GCACCTCGAT CATGCGCGCG
GCGATGCAGA TCGGGACGCA AATTCCGAAA CTCTGCGCCA CCGACATGAT GGACGCGTTC
GGCTCCTGCC GGCTCTGCCT CGTCGAAGTC GAGGGACGCA ATGGCACGCC GGCGTCCTGC
ACCACGCCGG TGGCGGAAGG AATTTCCGTC CGCACCCAGA CCGAGCGGCT GAAGGCGCTG
CGCAAGGGCG TGATGGAGCT CTACATCTCC GATCATCCGC TGGACTGCCT GACCTGTTCG
GCCAATGGCG ATTGCGAATT GCAGGACATG GCGGGCGCGG TCGGCCTGCG CGACGTGCGC
TACGGCTACA AGGGTGAGAC CCATCCCAAT CCGGGCGTCG ACGACTCCAA TCCCTATTTC
ACCTTTGACG CCTCGAAATG CATCGTCTGC TCGCGCTGCG TGCGCGCCTG TGAGGACGTG
CAGGGCACCT TCGCGTTGAC CATCGCCGGC CGCGGCTTCG GCTCGGTGGT GTCTGCCGGG
ATGCAGGAAA GCTTCCTCGG CTCGGAATGC GTGTCCTGCG GCGCCTGCGT GCAGGCCTGC
CCGACCGCGA CGCTGAACGA AAAGTCGATC ATCGAGATCG GCACCCCGGA ACATTCGGTG
GTGACGACCT GCGCCTATTG CGGCGTCGGC TGCTCGTTCA AGGCGGAGAT GCGCGGCGAG
GAAGTGGTGC GCATGCTGCC CTACAAGGAC GGCAAGGCCA ATCGCGGCCA TTCCTGCGTC
AAAGGCCGCT TCGCCTGGGG CTACGCCACC CACAAGGAAC GCATCCTCAA CCCGATGATC
CGCGACAAGA TCACCGACCC GTGGCGCGAA GTGTCGTGGG ACGAGGCGTT CTCCTACGCC
GCGTCGGAGT TCAAGCGCAT CCAGGCCAAA TACGGCCGCG ACTCGGTCGG CGGCATCACC
TCGTCGCGCT GCACCAATGA AGAGACTTTC CTGGTGCAGA AGCTGATCCG CGCCGGCTTC
GGCAACAACA ACGTCGATAC TTGCGCGCGG GTCTGCCACT CGCCGACCGG CTACGGGCTG
TCCACCACCT TCGGCACCTC GGCGGGCACG CAGGATTTCG ACTCCGTCGA GCACACCGAC
GTGGTGCTGA TCATCGGCGC CAATCCGACC GACGGCCATC CGGTGTTCGC CTCGCGCTTG
AAGAAGCGGT TGCGCGCCGG CGCCAAGCTG ATCGTGGTCG ATCCGCGCCG CACCGACATC
GTGCGCTCGG CGCGGGTCGA GGCGGCGCAT CACCTGCCGC TGCAGCCCGG CACCAACGTC
GCGGTGCTGA CCGCGATGGC GCATGTCATC GTCACCGAAG GGCTGGTCGA CGAGGCGTTT
GTGCGCGAGC GCTGCGACTG GGACGAATAT GAGGGCTGGG CGAGTTTCGT GGCGCTGCCG
CAGAACAGCC CGGAGCAGAC GCAAAGTGCG ACCGGCGTCG ATCCGACCGA ATTGCGGCAG
GCGGCGCGAC TGTTCGCCAC CGGCGGCAAC GGCGCGATCT ATTACGGGCT CGGCGTCACC
GAGCACAGCC AAGGCTCGAC CACCGTGATG GCGATCGCCA ATTTGGCGAT GGCCACCGGC
AATATCGGCC GGCCGGGCGT CGGCGTGAAC CCGCTGCGCG GCCAGAACAA CGTGCAGGGC
GCCTGCGACA TGGGCTCGTT CCCGCACGAA TTGCCGGGCT ATCGGCATAT CGGCACCGAT
TCGGTGCGTG AGAGTTTCGA GGCGCTGTGG GGCGTGCATC TCAACAAGGA GCCGGGCCTG
CGGATTCCGA ACATGCTGGA TGCCGCGGTC GACGGTTCGT TCAAGGCGCT CTACGTGCAG
GGCGAAGACA TCCTGCAATC CGACCCCAAC ACCAAGCACG TCGCCGCCGG GCTTGAGGCG
ATGGAATGCG TCATCGTCCA CGACCTGTTC CTCAACGAGA CCGCGAACTA CGCGCATATC
TTCCTGCCGG GCTCCACCTT CCTGGAGAAG AACGGCACCT TCACCAATGC CGAGCGCCGC
ATCCAGCGGG TGCGCAAGGT GATGACACCG CGCAACGGCT TGGAGGACTG GCAGGTCACG
CTGGGGCTGG CCAAGGCGAT GGGCTATCCG ATGAGCTATG AGCATCCCTC GCAGATCATG
GATGAGATCG CGGCGTTGAC GCCGACCTTC GCCGGCGTGT CCTACGCCAA GCTCGACGAA
CTCGGCTCGA TCCAGTGGCC GTGCAACGAC AACGCGCCGG AGGGCACCCC GGTGATGCAC
ATCGATCACT TCGTCCGCGG CAAGGGCAAA TTCGTCATCA CCGAATATGT CGCCACCGAC
GAGCGCACCG GGCCGCGCTA TCCGCTATTG CTGACCACCG GGCGAATCCT CAGCCAGTAC
AATGTCGGCG CGCAGACCAG GCGCACCGCC AATGTGGTGT GGCACGACGA GGATCGGCTC
GAGATCCATC CGCACGACGC CGAGCAGCGC GGAGTGAGGG ATGGCGATTG GGTGCGGCTG
GCGAGCCGCG CCGGCGAAAC CACGCTGCGC GCGCTGATCA CCGAGCGCGT CGCGCCGGGC
GTGGTCTATA CCACCTTCCA CCATCCGGAT ACGCAGGCGA ACGTGATCAC CACCGACTAT
TCCGACTGGG CAACCAATTG CCCGGAATAC AAGGTCACCG CGGTGCAGGT GGCGCCGTCG
AACGGCCCGT CGGAATGGCA GAAGGCCTAT GACGAGCAGG CCCGCCAGGC GCGCCGCATC
GCCTCCACCA TCGAAGCCGC GGAGTAA
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| Protein sequence | MSLIHEIDFG TPRSTSTTMV TLSIDGQSVT VPEGTSIMRA AMQIGTQIPK LCATDMMDAF
GSCRLCLVEV EGRNGTPASC TTPVAEGISV RTQTERLKAL RKGVMELYIS DHPLDCLTCS
ANGDCELQDM AGAVGLRDVR YGYKGETHPN PGVDDSNPYF TFDASKCIVC SRCVRACEDV
QGTFALTIAG RGFGSVVSAG MQESFLGSEC VSCGACVQAC PTATLNEKSI IEIGTPEHSV
VTTCAYCGVG CSFKAEMRGE EVVRMLPYKD GKANRGHSCV KGRFAWGYAT HKERILNPMI
RDKITDPWRE VSWDEAFSYA ASEFKRIQAK YGRDSVGGIT SSRCTNEETF LVQKLIRAGF
GNNNVDTCAR VCHSPTGYGL STTFGTSAGT QDFDSVEHTD VVLIIGANPT DGHPVFASRL
KKRLRAGAKL IVVDPRRTDI VRSARVEAAH HLPLQPGTNV AVLTAMAHVI VTEGLVDEAF
VRERCDWDEY EGWASFVALP QNSPEQTQSA TGVDPTELRQ AARLFATGGN GAIYYGLGVT
EHSQGSTTVM AIANLAMATG NIGRPGVGVN PLRGQNNVQG ACDMGSFPHE LPGYRHIGTD
SVRESFEALW GVHLNKEPGL RIPNMLDAAV DGSFKALYVQ GEDILQSDPN TKHVAAGLEA
MECVIVHDLF LNETANYAHI FLPGSTFLEK NGTFTNAERR IQRVRKVMTP RNGLEDWQVT
LGLAKAMGYP MSYEHPSQIM DEIAALTPTF AGVSYAKLDE LGSIQWPCND NAPEGTPVMH
IDHFVRGKGK FVITEYVATD ERTGPRYPLL LTTGRILSQY NVGAQTRRTA NVVWHDEDRL
EIHPHDAEQR GVRDGDWVRL ASRAGETTLR ALITERVAPG VVYTTFHHPD TQANVITTDY
SDWATNCPEY KVTAVQVAPS NGPSEWQKAY DEQARQARRI ASTIEAAE
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