Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4634 |
Symbol | |
ID | 3972145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 5178284 |
End bp | 5179294 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637927746 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
Protein accession | YP_534475 |
Protein GI | 90426105 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.264682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTCG CGGTGTTCAA TACCAAGCCC TACGATCGGC GGTTTCTGAC CGCGGCCAAT ACCAAGGACG GCGACAGGCA TGATCTGCAT TTCCTCGAGC CGCGCCTGGG GCCGGACACA GCGCAGCTGA GCGGCCAGGC CGAGGCGATC TGCGCGTTCG TCAACGATGG GCTCGACCGA TCCGTGCTGC GAATGCTGAA GGCCAACGGC GTGCGACTTG TGGCGTTGCG TTGCGCCGGC TTCAACAATG TGGATCTGAT GGCCGCGCGC GATCTTGGAA TCGCGGTGGC GCGCGTGCCG GCCTATTCGC CGGCAGCCGT GGCGGAGCAC ACGGTCGCGC TGATCCTGTC CCTCAACCGG AAGATCCATC GCGCTTACGC GCGGGTCCGC GAAGGTAACT TCGCTCTGGA AGGATTGCTC GGGTTCGATC TCAAAGGGCG TTGCATCGGA ATTGTCGGCA CCGGAAATAT CGGTCTGTCG GTCGCCGGCA TCATGGCCGG ATTCGGCTGT CGCGTGCTGG GTTTTGATCC TCACCCCAAT CCCGCCTTCG CGGCGCTCGG AGCACGCTAT GTCGGCCTGC AGGAGTTGCT GTCGCAGTCC GACATCGTCA CGTTGCATTG CCCACTGACC CCGAACACCC ATCACGTGAT CAATGCGACG GCGATCGCTG CGATGAAGCC GGGCGTGATG CTGATCAATA CCGGACGCGG CGCGCTCATC GATACGCGGG ACGTGATCCA GGGATTGAAG AGCAAGACGA TCGGCTATTT GGGTCTCGAC GTCTATGAGG AGGAAAGCGA GCTCTTCTTC GAGAACCTGT CCGGGCAGAT CATTCAAGAC GATGATTTTG CCCGACTGCT GACGTTCCCC AACGTTCTGA TCACCGCTCA CCAAGCCTTC TTCACGCAAG AGGCGTTGAC GGCCATCGCC GAGACCACCA TCCGCAATAT CTCGCAGTTC GAATCGGCCG GCGAGGCGGC GCATCCGGTC GCCTTGGAAT GGCGCGGCTG A
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Protein sequence | MKVAVFNTKP YDRRFLTAAN TKDGDRHDLH FLEPRLGPDT AQLSGQAEAI CAFVNDGLDR SVLRMLKANG VRLVALRCAG FNNVDLMAAR DLGIAVARVP AYSPAAVAEH TVALILSLNR KIHRAYARVR EGNFALEGLL GFDLKGRCIG IVGTGNIGLS VAGIMAGFGC RVLGFDPHPN PAFAALGARY VGLQELLSQS DIVTLHCPLT PNTHHVINAT AIAAMKPGVM LINTGRGALI DTRDVIQGLK SKTIGYLGLD VYEEESELFF ENLSGQIIQD DDFARLLTFP NVLITAHQAF FTQEALTAIA ETTIRNISQF ESAGEAAHPV ALEWRG
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