| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4617 |
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| Symbol | |
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| ID | 3972108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5155970 |
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| End bp | 5157412 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637927728 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_534458 |
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| Protein GI | 90426088 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGACC TTCTATCCGG TTTGATCAAA TTGTCGCCGG ACAGCGACGA GACATTGTTG
CGACAGCTCA CGCAACAATT GAGATCACTC ATCACGAGCG GACGTTTGGC ACCAGCTCAG
CGCTTGCCTT CAAGTCGCGA TCTGGCTCAA TCACTGAGTG TCGGCCGCAA CACAGTCTCG
TTTGCGATAG AGCAGCTTGC AGCCGAGGGT TATTTGACGA CTTCGCCTGG CCGACGGGCA
GTCGTGTCAA TTGGAGCCTC GCTTGATGCA AGGAAGCCGC AGCGAATAAA GACCGATCAG
CGTACCGTGG AACTCAGGGT GTCGCCTTGG GCACGCAGTC TCCATAACGC GAGTTGGCCG
CCAATCTATA GGGGGCGACC GCGCGCGTTT CAGCCGGGAT TGGCTGACGA GCGGGAGTTT
CCTCACGATA TCTGGGCCCG CTGTCTGCGG CGTGCAGCCC GTAGCGCCCG TGTACGCGGA
GACAGTTCCC ACAACAGCGC CGCACTGCGG AAAGCATTGC AGCAGCATCT GGCGGAGCAT
AGGGGCGTCA AGGCGACACC TGACCAAATC ATGATTGTGC CTTCCGCACA GGCGGGGATT
GCGTTGATCG CCAAAGTGAT GATCGGTACG GGCGATCTCG CCTGGATTGA AAGTCCAGGG
TATGGCGGGG CGTTCGCCGC ATTGCAAAGC GCCGGCGCTA TCGTCGCTGG AGTGCCGCTC
GATGAGTTTG GTATGGCTTT GGGCGAACGC AAGGACATTC CTCGCCTGAT TTTTGTAACC
CCGTCCCATC AGTACCCGAC GGGACGGCTG ATGCCTGCCG GTCGTCGGCT GGAGTTGCTC
CGATTCGCAG CATCCGTTGG GGCTTCGATC GTCGAGGATG ACTACGACAG CGAATTTCAT
TATGAGGCGC GCCCAGTGTC TGCATTACAG GGGATGGGTC TTTCGACAAC AGTCCTTTAC
GTCGGCACGT TTTCGAAATC GATGTTTGCG GATATTCGGA TTGGCTACAT CATCGTTCCC
GAAAGACTCA TCGAGATATT CGAATTAGCG CAGCGCCATA TGGGATTGTC GGCAGCGATA
CCGATGCAGG ACGCGTTGGC CGAGTTCATT CGTAATGGAA TGTACCTCGC TCACGTCCGA
AAAATGACCC GCCTCTACAA GGAACGGCGC GACCAATTGC TGAAGGCCCT CGCATCCGAG
ACGGGCGATC GGCTGTCGAT CGAGATCCCA GCGGGGGGGA TGCAACTCTT GGCTCGATGT
GGTGCTTTTG CGAGAGACGA TCAGCTATCG GCGCGGCTTC TTGAAGCGGG AGTCGTCGCC
CGCCCCTTGT CGAGCATGGT CTTTCACAAG ACTAAGGCGC AGGGGCTCTT TCTCGGCTTC
GCCGCGTGGA ATGACGTCGA GATCGAGCGG GCTGCTCGCA TCCTTGGCAG GATTGTCCGT
TGA
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| Protein sequence | MGDLLSGLIK LSPDSDETLL RQLTQQLRSL ITSGRLAPAQ RLPSSRDLAQ SLSVGRNTVS
FAIEQLAAEG YLTTSPGRRA VVSIGASLDA RKPQRIKTDQ RTVELRVSPW ARSLHNASWP
PIYRGRPRAF QPGLADEREF PHDIWARCLR RAARSARVRG DSSHNSAALR KALQQHLAEH
RGVKATPDQI MIVPSAQAGI ALIAKVMIGT GDLAWIESPG YGGAFAALQS AGAIVAGVPL
DEFGMALGER KDIPRLIFVT PSHQYPTGRL MPAGRRLELL RFAASVGASI VEDDYDSEFH
YEARPVSALQ GMGLSTTVLY VGTFSKSMFA DIRIGYIIVP ERLIEIFELA QRHMGLSAAI
PMQDALAEFI RNGMYLAHVR KMTRLYKERR DQLLKALASE TGDRLSIEIP AGGMQLLARC
GAFARDDQLS ARLLEAGVVA RPLSSMVFHK TKAQGLFLGF AAWNDVEIER AARILGRIVR
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